Pungitius pungitius (ninespine stickleback): 119219263
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Entry
119219263 CDS
T07626
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119219263 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119219263 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119219263 (nup153)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119219263 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
119219263
NCBI-ProteinID:
XP_037330242
LinkDB
All DBs
Position
17:10321825..10335239
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AA seq
1506 aa
AA seq
DB search
MTAIRRRNADRHSDERAMAATGGGKIRSRRYHIASKPYAKSKQQPSGLISRVTDTVKSIV
PSWLQKYFKNEDAPEGAEDVLETVRNCLPPPPPNGSEEAPPPVDGCDSPEPSTSNMEPST
SRASLNFQDYVLSRPPLSRSHLQFPPLDASSPTLGASSSHFSQPSTSSAPGPFSTGFSLV
KEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASPPQLWSPEMERTHCGPQPAQSSL
RKPSFNLSVFGNSSNSSLNSTLLNSSQLGDSPFYPGKTMYGGASAVRTSRARPGTPYQAP
VRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAAAAAAAASSPLSASMD
GTNLDVSNFQSKRKRMDSSLPPVQKLVVPVAASVSGNRSVSFRPTLTPGGVSRTLDRTPR
ETPKRQSPQLSEVTPGPSKSTKIPSAPVYPLSSTPAASSVTSGGGKMKRERTSTRPSSKR
SEEDEVAEVLDLPTISLPISTSALPSFSFSSPLPPLANTNSTAPNPTPVTPAKEVVTDKA
PTISTPPCLPFTFSSPIVKATAASPPAFSPSAGFTFSAPVAKLGPSMSNGKLSSPIVAAL
KSATSKSPEDFDGLFKPAKALKQGSVLDLLKAPGFASPVAGTSPGPDIALLQTSTHTTAP
SSSSAATTSTSLSSKGFSDVFKAPPGWSCDVCMVQNKPSETKCACCMAPQPSSSKSMDIT
PSAATSVGLESSSTNTTSTTTTNAGFGAMFSKPAGTWDCDTCLVLNKPDAVKCVACETAK
PGTGLKPSLTLPSAFSAVKTVSPPTAPVSTVFIGFGDKFKKPAGAWECDTCMVENKAEDT
KCVACMSAKPGASAGASSSASSAPVFGLGDAFKMPEGAWECDVCLVQNKAADVQCVACQA
VKPGAKVEPKAFGSSAGGTSTSNSGGFKFGAPDSTSGSGSVGFKFGGSLKESSSSSSDGF
KFGVPFGSSSSETTSKDTTASSGFKFGSSSEGFKFGTASSDDKKSDQSAAGSGFKFGASG
GIAFGIGSSSTDGNSSKGGFTFGLSKPEEKTPDTTTTKPPRLSFTPPAASQEKGEGAVSS
NDATSTTTTGSVFGSLASAAPQGGSAFGSIQTDKEPAAPTFTFGKQEEKEAAAASSAPSA
FLFGAANKDADAAPPAAGNLGGFSFSKPSAPTEQTPPPYNFGKAADKSETSAAEAPKPSF
SFGQSAADSSTALKPAFSFMAGNPTNATTSSSTTSTQSLFGTTNSINNTSSAQGPAPSGF
MFGQTAAAPGDAPPAKAFLFGQGQDSQASAPSAAPLNSTPAPSPAQPFIFGAPATAAAPA
AAAAAPPSFGFGAAAPTTASTSVPSAALSPFAFNPAPSGGFGANQNSSFVSTFGSPFTAT
PSQPPAFGAKPNTTPVFGQQTNSTPVFGVAANSAQGGGFQFGGASAFGATNNPSGGVFTF
GAGGAPSPGPPANTSIAPQSGPPGGGFNFSQPPAFNIGSAKTFTAAPAGPQTIAGRKIKT
AVRRRK
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacgccgatagacactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcacatcgcctctaaaccttacgccaag
agtaaacagcaaccgtcgggcctcatcagtcgagtgacagacacggtgaagagcatcgtt
ccttcctggctgcagaaatacttcaagaatgaagatgctcctgaaggagcagaggatgtt
cttgagacagtccggaactgcctgccaccacctcctccgaatggcagcgaagaggcacct
cctcccgttgatgggtgtgactccccagagccaagcaccagtaacatggagccctcaacc
agccgggcgtccctaaactttcaagattatgttctttctcgacctccactgagtcgttcc
cacctccagttccctccactggatgcctcctccccgaccctgggggcctccagcagccat
ttctcccaaccctccacctcctctgcccctggacctttttccacaggcttctccttggtc
aaagaaatcaaggacaacctctcgcagcacgaagatgataacatctccaccactagcggc
ttctcctcccgtgcctcagacaaagatgtccctacttccaaaacggcgtcgcctcctcaa
ctttggtcccccgagatggagagaacacactgtgggcctcaaccagcccaatccagtctg
agaaagccttcttttaacctgtctgtatttggaaattcctccaattcgtcattaaacagc
acattactaaactccagccagctgggagattcacccttctaccccgggaagaccatgtat
ggtggggcatctgcggtcaggacctcccgtgctcgccctggaacaccgtaccaggcccct
gtgaggagacagatcaaggccaagcctgctggggctcaaccctgtggggtgaccagcgcc
acagccagacgcatccttcagtccttggagcgaatgtcgagccccctggctgatgccagg
agaatcccagcagcagcagcagcagcagccgcctcctccccgctgtcagcatcaatggat
ggcacaaatctagatgtttcaaatttccagtcgaaaaggaaacgtatggattccagcctt
ccaccggtgcagaagctggtggttccagttgcagcgtcggtgtcaggaaaccgctctgtg
tccttcaggcccaccttaactcctggaggagtgagccgaactcttgacaggacccccaga
gagacgcctaagagacaatcaccgcaactttccgaagtgaccccaggtccatctaaaagc
acaaagattcccagtgccccggtctatcctctgtccagcacgcctgcagccagcagtgtg
acctccggagggggcaagatgaagagagagaggaccagtacacggccttcctccaagcgc
tccgaagaggacgaggtggctgaggttctggacctaccaacaatttcacttcccatcagc
acctctgccttgccaagcttcagcttctcttcccctcttcccccgctcgccaacaccaac
agcacagctcccaaccccacgcctgttactcccgctaaggaagtggtcacagataaggca
ccaacgatctctacacctccctgtctaccttttactttttcctctcctattgtcaaagca
actgctgctagtcctcccgccttttccccctcagctggattcacttttagcgcacccgta
gcaaagttaggaccctccatgtcaaatgggaagctgtcctctcccatagttgcagcgctg
aagtcagcaacaagcaaaagtcccgaagattttgacgggcttttcaagccagctaaggcc
ctgaagcagggcagtgtgttagatcttctcaaggcgcctggctttgcttcgcctgttgcc
gggacttctccaggaccagacattgctctgctgcagacctccacacacaccacagccccc
tcctcctcctccgccgccaccacctccacctccctctcttcaaaagggtttagcgatgtg
ttcaaagccccaccaggctggagctgtgatgtctgcatggtgcagaacaagccgtcagag
accaaatgtgcttgctgtatggccccgcagccatcttcatccaaatctatggacattaca
ccttcagctgcgacctcagttgggctagaaagcagcagcacgaacaccacctccaccact
acaacgaacgcaggtttcggggcaatgttctccaaaccggcaggaacttgggactgtgat
acgtgcctggttctaaacaaacctgacgcagtgaagtgtgtggcctgtgaaacggccaaa
cctgggacagggcttaaaccctcactgactcttccttctgccttctcagctgttaagact
gtgtccccgcctacagcccccgtttctacagtgttcatcggatttggagacaagttcaaa
aaacctgcgggtgcatgggaatgtgacacgtgtatggtagaaaataaggcggaggataca
aagtgcgtggcctgcatgagcgctaaaccaggagcctcagcgggcgcctcttcttcagcc
agcagtgccccagtgtttgggttgggagatgcgttcaaaatgccagagggagcctgggaa
tgcgatgtctgtcttgtacagaataaggcggctgatgtgcagtgtgtcgcctgtcaggca
gtcaaacccggagctaaagtggagcccaaagcttttggttcatcagctggcgggacttca
acctctaattctggaggctttaagtttggcgcaccagacagtacatccggatccggatct
gtaggtttcaagtttggaggctccttgaaagagtcctcctcttcatcgtcagatggattc
aaatttggagtcccgtttggaagctcctcatcagaaacaacttctaaagacactactgcg
tcgtcagggttcaaatttggcagctcatctgagggctttaaatttgggactgcctctagt
gatgataaaaagtctgaccaatccgctgcaggttctgggtttaagtttggagcaagtggt
gggatagcatttggaattggctcatccagcacagacggtaattcttctaagggcggcttc
acatttggactctcaaaaccagaggagaaaacccccgacaccaccaccaccaaaccaccc
cgtcttagtttcactcctcctgctgcctctcaggagaaaggtgagggtgctgtatcttca
aatgacgccacctccaccaccaccaccgggtcagtgtttggaagtttggcgagcgctgca
ccacagggtggctctgcttttggatccatacaaacggacaaagagccagcggctcccacg
tttacatttggaaagcaagaggaaaaagaagcagcagccgcctcgtcggctccgtcggcc
ttcctctttggtgccgctaataaagatgcagatgctgcaccaccagcagccgggaacctg
ggaggcttttccttcagcaagcccagtgcgccaacggaacaaactcctcccccgtacaac
tttggcaaggcggcagacaagagtgaaacgtctgcagcagaggcaccaaaaccctctttt
agctttggccaaagtgctgcagattcttctactgctctgaaaccagcgttttccttcatg
gccggtaatcccaccaacgccaccacttcatcatccaccacctcgacgcaaagtctgttc
ggcacgaccaacagcatcaacaacaccagctccgctcaaggccccgctccgagcggcttc
atgttcggtcaaaccgccgccgcgcctggtgacgctcctccggccaaagccttcctcttc
ggccagggtcaggacagccaggcgtccgcaccgtcagctgcacctctgaactctacgcct
gctccatccccagctcagccctttatctttggtgcacccgccactgctgccgctcctgcg
gctgccgccgccgctcctccatctttcggctttggagcagccgcacccaccactgcctcg
acttcagttccctctgcagccctctcaccatttgcattcaacccggccccctctggtgga
ttcggggccaatcagaattcgtcattcgtttccaccttcgggtcccccttcacagccaca
ccttcacagcccccggccttcggggccaaacccaacaccacgcctgtctttggacagcag
accaactccacacctgtctttggggtggctgctaattctgcacaaggtggaggctttcag
tttggaggagccagtgcatttggtgccacaaacaatccctcgggaggagtgtttactttc
ggagcaggaggggcaccatctcctggcccccctgcaaacacctccatcgcaccacagtca
ggaccacctgggggtggatttaatttttcacaacccccagcattcaatattgggtcagcg
aaaaccttcaccgccgctcctgctgggccgcaaaccattgctgggcgcaagatcaagaca
gcggtgcggcgcagaaagtag
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