Pungitius pungitius (ninespine stickleback): 119219303
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Entry
119219303 CDS
T07626
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119219303
09142 Cell motility
04814 Motor proteins
119219303
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119219303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119219303
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119219303
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
119219303
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
119219303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
WDR55
Beta-prop_EML
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SPT8
Big_2
Mu-transpos_C_2
Motif
Other DBs
NCBI-GeneID:
119219303
NCBI-ProteinID:
XP_037330321
LinkDB
All DBs
Position
17:12459759..12502327
Genome browser
AA seq
678 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIRQEKKIKEEERKKKEVRKKSESQQKREATPEDSDLDRKR
RETEALLQSIGISPEPPLVHSLQPVMSDSCFFHYLVPTPVSPSKSGSTPSEAGSQDSTDG
AAAAAGSFYKLDFTNRSGFSKNKSQAQSSRTLQWDADPSVLQLQADSELGRRMQRLGACK
ITQVDFLPKEVVAYCKETQTPLTAHLSEVEEEEEDEEMMEAKPGPESEQQDEEDNRENTE
GSFPVLRELTEEERQQILHSSEFQSFFDCSIRVMERALAEDGDIFFDYSGRDPEDKDGDS
ASGSSLSFSRLFYDEHWSKHRVITCLDWSTQYPELLVASYNNNEDAPHEPDGVALVWNIK
FKKATPEYIFHCQSPVVSVGFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAA
HTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKSKPVAVTGMAF
PTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVGTVDFSHLFIT
SSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPATFAAVDGMGRLDLWNLNNDTE
VPTASVTIEGASALNRVRWSTGGKEVAVGDSEGRVWIYDTGELSVTHTDDWGRFARTLME
IRANRGDGEEEGPMELAS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacttaaaagcagagctggagcgcaagaagcagcgcctcgcccaa
ataagacaggaaaaaaagataaaggaggaggagaggaagaagaaagaggtaaggaaaaaa
tccgagagccagcagaagagagaggccactccggaggattcagacttggaccgaaagcgt
cgggagaccgaggccctgctccagagcatcggcatctcaccggagcctccgctagtccat
tctttgcagcctgtaatgtcagattcatgtttttttcattatttagtcccgacccctgtg
tcaccctccaaatcaggaagcacacctagcgaggcggggagccaggattccactgatgga
gcagcagcagcagcaggcagcttttacaaattggattttacaaataggtcaggtttctct
aaaaacaagtcccaagcacagagctcaaggacgctgcagtgggacgcagacccctctgtg
ctgcagctgcaggctgattctgagctcgggcgcaggatgcagcggctgggagcctgtaag
atcacacaggtagacttccttcccaaggaggtggtggcttactgcaaggagacgcagacg
ccgctcaccgcccacctgtctgaagtggaggaagaagaggaggatgaagagatgatggag
gcgaagccaggccccgagtctgagcagcaggatgaagaggacaacagggaaaacacagaa
ggctcatttccagtcctgcgtgaactgacagaggaggagaggcagcagatcctgcactcc
tctgagtttcagagtttcttcgactgcagcatccgggtgatggagagagctctggccgag
gacggagacatcttctttgactacagcggccgggacccggaggacaaagacggggactcg
gccagcggctccagcctgtccttcagtagactcttctacgatgaacactggtcgaaacat
cgcgtgatcacatgccttgactggtccactcagtatcccgagttgctggttgcctcctat
aacaataatgaagatgctccccatgaacctgatggtgttgcgcttgtatggaacatcaaa
tttaaaaaggccacaccagaatacatctttcactgtcagtctccagtggtatcggtgggc
ttcgccaggtttcatcccaaccttgtcgtgggcgggacctactcgggacaaatcgtcctg
tgggacaaccgcagtcaccgccggacgcccgtccagaggacgcctctgtctgccgctgct
cacactcacccggtgtactgcgtgaacgtggtcggcacacagaacgccaacaacctgatc
actgtgtccacagacggacggatgtgctcctggagtctggacatgctttcccagccacag
gagtccatggagctggtatacaataaatccaaacctgtagcggtgacaggcatggctttt
cccacgggagacgttaacaactatgtggtcgggagtgaggagggaactgtgtacactgca
tccagacacggcagcaaggcgggtatctgtgagatgttcgagggccaccaggggccggtg
accggcatcagctgccacagcgcagtgggcaccgtcgacttctcccacctcttcatcacg
tcctccttcgactggaccgtcaaactctggagcaccaagcacaacaagcctctgtactcg
tttgaggacaacgccgactatgtgtatgacgtcatgtggtcgcccgtgcaccctgcaacc
ttcgccgccgtggatgggatgggccgcttggacctgtggaacctcaacaacgacactgag
gtcccgactgccagtgtgacgattgagggggcgtcagccctcaacagggtacgctggtcc
acggggggaaaggaggtggctgtgggagactcggaagggcgagtctggatctacgatact
ggagagctgtcggtgacccacaccgatgactgggggcgcttcgctcgtaccctgatggag
attcgtgctaaccgaggcgacggcgaggaggaggggcctatggagctggcttcgtag
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integrated database retrieval system
