Pungitius pungitius (ninespine stickleback): 119219314
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Entry
119219314 CDS
T07626
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119219314 (nup42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119219314 (nup42)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119219314 (nup42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
Arnt_C
Motif
Other DBs
NCBI-GeneID:
119219314
NCBI-ProteinID:
XP_062414263
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All DBs
Position
17:13166576..13173308
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AA seq
291 aa
AA seq
DB search
MDMDIWESSGQWVFSCYSSSKAPLSGFTDLSPEELRLEYYSTRASGDPQSYVNGINQLLN
QWRSRVQELKLMTPATRTALLAEINNPATQASPSGFGSATGFGSAVSSLEGKGFGAPAPA
TANTFSFAAQTVGFGSSAAPPSAAGFGGPLAAPTQPPSGFGSSTADSSAVAASSFSFAAP
SANKPAAASGFGSASGFSFSSTATPGGGFGSGFGSEAPASAGSGGMFGQTGGGFGKAAAP
QAAGGSAGGASDSLFSQESNMTPEELNQFRAKRFTLGQIPLKPPPADMLVV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatatttgggagagttcaggacagtgggtcttttcgtgttattctagctcc
aaggcacctttatctggtttcactgatctctctccagaagagctcaggctggagtattac
tccactagagcttcgggagatccgcagagctatgttaatggtatcaatcagttgctcaac
cagtggagaagcagagtccaggagctgaagcttatgactccagccacgcgcacagctttg
cttgctgagataaacaacccagcaactcaggcctctccaagtggcttcggttcagctact
ggatttggatctgctgtatccagcttggaaggaaaaggctttggggctccggcgccagcc
acggccaacacgttcagctttgcggcccaaactgttggatttggttcctcggcggcaccg
ccctccgccgcaggttttggcggccccttagcagcacctacacaacctccctccggcttt
gggtcctccaccgcggactcctcagctgttgccgcgtcgtcgttctcctttgctgctccg
tccgccaacaagccggcggccgcttcaggttttggctcggcctccgggttcagtttttcc
tccacagcgacccccggcggaggattcgggagcggttttgggtctgaagcgcccgcctca
gcaggaagcggcggcatgtttggacagacgggtggagggttcgggaaggctgctgctcca
caggcagcaggggggtctgccggtggggcatcggactctctgttttcacaagagagcaat
atgactccagaggaactgaaccagttcagggctaagaggttcactctgggccagattcct
ttaaagcctcccccagctgacatgcttgtggtatga
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