Pungitius pungitius (ninespine stickleback): 119219317
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Entry
119219317 CDS
T07626
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119219317 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
119219317
NCBI-ProteinID:
XP_037330362
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Position
17:complement(12400479..12408592)
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AA seq
478 aa
AA seq
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MMFTMSAAAVAVWLGAAYIVHAYDVEHPAFHERNAPMERSAGSKRRASPYGAVVTILSRS
HADRNVYPSAGVLFVHVLEREHFKGEFPPYPKSGDASSDPITFNTNLMGYPDRPGWLRYI
QRTQRSDGVLYGSPTAEHVGKPSVIEITAYNRRTFETARHNLVVNIMATEEFPLPYQAEF
YIRNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYV
MVGADVPFSSCLREVESPHNQLRCSQEMEPAISCDKKFRAHFHIDWCKISLVDINKVVPV
YVTRSEPGTGVLPEFGEYNPPSESLMGRNYFSDFLVTLAVPSAVALVLFFILGYTMCCRR
EGVKKRNMQTPDIQLVHHGSIQKSTKELRGMSKNREISWPLSTLPVFNPVSGEVVPPIHP
DNYETTSMPLMQTQTNLQNQITIPQQRPSGDNYVMSTFRRLEVNGIPEERKVAEALDL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaccatgtccgctgccgccgtcgcggtgtggctcggcgcggcttacattgtg
catgcctacgatgtcgaacaccccgcttttcacgagagaaatgcccccatggagcgatcc
gcgggctcgaagcggagagcgtccccgtacggagctgtggtcaccatcttgtcgaggtca
cacgccgatcggaacgtctacccgtccgccggggtgctgtttgtccacgttctggagcga
gagcacttcaaaggagagtttcctccctaccccaaatcaggtgacgccagcagtgacccg
atcactttcaacaccaacctaatgggctaccccgacaggccgggctggctgcgctacatc
cagaggacgcagcgcagcgacggcgtgctctacggctcgcccaccgccgagcacgtgggc
aagccctccgtcatagagattaccgcctacaacaggcgcactttcgagacggcacggcac
aacttggtcgtgaacatcatggccacggaagagttccctctgccctaccaggccgagttt
tacatccggaacatgaacgtggaggagatgctggccagcgaggtgctgggcgacttcctg
ggggcggtgaagaacgtgtggcagcccgagcgcctcaacgccataaacatcacctcggcg
ctggaccgcggcggccgcgtgcccctccccatcaacgacctgaaggaaggagtgtacgtg
atggttggcgccgatgttcccttctcgtcgtgcctgcgggaggtggaaagcccacacaac
cagctgcgctgcagtcaggagatggagcccgccatcagctgtgacaagaagttccgagct
cattttcacattgactggtgcaagatctctctggtcgacatcaacaaagtggtcccggtg
tacgttacccgctccgagccgggaaccggggtgctgcctgaatttggggagtacaacccg
ccctccgagtccctgatgggccggaactacttctcggacttcctcgtcacactggcggtt
ccctccgccgtggcactggtcctcttcttcatcctcggctacactatgtgctgccgacgg
gaaggggtgaaaaaaagaaacatgcaaacaccagacatccagctggttcaccacggctcc
atccagaagtccaccaaggagctgcgcggcatgtccaagaaccgggagatctcctggccc
ctctccaccctgcccgtcttcaacccggtcagcggcgaggtggtgccgcccatccacccg
gacaactacgagaccaccagcatgcccctcatgcagacacagacgaatctgcaaaaccag
attacgataccacagcaacggccatcaggagataattatgtcatgtcgacatttcggagg
ctggaggtaaatggtattcctgaggagcgaaaggtggctgaagcactggatttgtga
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