Pungitius pungitius (ninespine stickleback): 119219424
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Entry
119219424 CDS
T07626
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119219424 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119219424 (snrpd1)
03032 DNA replication proteins [BR:
ppug03032
]
119219424 (snrpd1)
Spliceosome [BR:
ppug03041
]
Complex A
U1 snRNP components
Sm proteins
119219424 (snrpd1)
U2 snRNP components
119219424 (snrpd1)
Complex B
U1 snRNP components
119219424 (snrpd1)
U4/U6.U5 tri-snRNP components
119219424 (snrpd1)
Complex C
U2 snRNP components
119219424 (snrpd1)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
119219424 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
119219424
NCBI-ProteinID:
XP_037330522
LinkDB
All DBs
Position
17:10456675..10459348
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagtcaggtttttgatgaaactcagccatgagacggttaccattgaactaaag
aatggcacccaggtgcatggcaccatcacaggtgtcgatgtgagcatgaacacccacctg
aaggcagtaaaaatgaccctgaaaaatcgggagcccactcagctggaatcgctgagtatt
cgtggcaacaatattcgctactttatccttccggacagcctcccactggacaccttgctg
gttgacatcgaacccaaggtcaagtccaagaagagagaagcagtggctggacgcggacga
ggcagaggaagaggccgaggtagaggaagaggccgaggtcggggcggcccaaggagatga
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