KEGG   Pungitius pungitius (ninespine stickleback): 119219533
Entry
119219533         CDS       T07626                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119219533 (tdp2b)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     119219533 (tdp2b)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos UBA_8 Exo_endo_phos2 NAD_kinase TAP_C STIV_turret_3rd
Other DBs
NCBI-GeneID: 119219533
NCBI-ProteinID: XP_037330696
LinkDB
Position
17:10021294..10023948
AA seq 362 aa
MASNVASDSDTPSVSNVERSRSRLCDEFAALTGSDSAVAQCYLAEHEWEMERALNSFFDA
DLEKVFEEDFPDSGTSPSKKRQKVEEKPPTDCVDLTGDSPASTRKPSDEDDNKLSLISWN
VDGLDTDNLGERARGLCSFLVLYTPDVVFLQELIPPYVQYLKKRAVSYLIIEGGEDGYFT
GIMLKKTRVRFLESEIVSYPTTQMMRNLLVAQVTFKGQKLCLMTSHLESCKGQAEERMKQ
LRVVIQRMREAPADVTVLFGGDTNLRDTEVAKVGLPSSVCDVWERLGKQEHCRYTWDTKA
NNNKKVPYISRCRFDRVYLRPAAKDGVPRLAPDHMALVGLDKLDCGRFTSDHWGIYCSFA
SA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcttctaacgttgcatcggactcggacacgccatcggtttctaacgtggaacgaagc
aggagtcgtctatgcgatgagtttgcggcattgaccggatccgatagcgcggtggctcag
tgctacctggctgaacacgagtgggagatggagagagctttgaattccttctttgatgct
gatttggaaaaagtatttgaagaggatttcccagacagcgggaccagcccctccaaaaag
aggcagaaagtagaggaaaaacctccaacagactgcgtagatttgacgggagacagtcca
gcctcgacgcgcaaaccctctgatgaagacgacaataaactgtctctgatctcctggaac
gtggatggactcgatacagacaaccttggagaacgcgccagaggcctgtgctccttctta
gtcctatacactccagacgtggtgtttctacaggagctcattccaccttacgtccagtac
ttgaagaaacgggctgtcagctacctgatcattgaaggaggcgaggatggttacttcacc
gggattatgctgaagaagacacgggtccgattcttggagagcgagatagtatcttatccc
acaactcaaatgatgaggaatctgcttgtagctcaggtgacattcaaaggccagaagctg
tgtctgatgacgtcccacctggagagctgtaaaggccaagcagaggaacggatgaaacag
ctgcgagtggtgattcagaggatgagagaggcacctgctgacgtcaccgtcctgtttgga
ggggacacgaacctgagggacactgaggtggccaaggtgggtctgccctccagtgtctgc
gatgtgtgggagcgactgggaaagcaggagcactgccgctacacatgggacaccaaagcc
aacaacaacaagaaggtcccttacatcagtcgctgccgcttcgaccgggtctacctccgc
cccgcggccaaggacggcgtcccacgcctggcccctgaccacatggccctggtggggctg
gacaagctggactgtggacgcttcactagtgatcactggggaatttactgtagcttcgcc
tccgcatag

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