Pungitius pungitius (ninespine stickleback): 119219613
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Entry
119219613 CDS
T07626
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119219613 (top2b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119219613 (top2b)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
119219613 (top2b)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Topoisomerases
119219613 (top2b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
119219613 (top2b)
Centrosome formation proteins
Centriole proteins
119219613 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119219613
NCBI-ProteinID:
XP_062414270
LinkDB
All DBs
Position
17:complement(15317788..15332694)
Genome browser
AA seq
1630 aa
AA seq
DB search
MSNGAAGSTGLAWMEAANGRGDAGKMVEDSKKAKAASKLSVERVYQKKTQLEHILLRPDT
YIGTVEPITQQMWVFDEEIGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMNAIKITI
DPESNTVSIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKL
CNIFSTKFTVETACKEYRHSFKQTWQNNMSKTSEPKIKFFDGDDFTCVTFQPDLSKFQME
KLDKDTVALLTRRAYDVAGSCRGVKVTLNGKKLPVTGFRSYVDLYVKDKLDEMGVALKVV
NETVNDRWEVCLTLSEKGFQQIGFVNSIATTKGGRHVDYVVDQIVAKLIEVVKKKNKAGV
TVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCPLSDKFIRGATNCGIVE
SILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSGECTLILTEGDSAKSLA
VSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYEDPESLK
SLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKNKQESVF
YSIPEFDEWKKNTENFKTWHIKYYKGLGTSTSKEAKEYFADMEKHRISFRYSGAEDDAAI
TLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTQARHLSYNDFINKELILFSNS
DNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIV
NLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPSGDSNLLKFL
YDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRLLNHQDPLPML
PSGGYKNFKGVIHELGQNQYLVSGEVLVIDRNTIEITELPVRTWTQAYKESVLEPMLQGN
DKTPALIYDYKEYHTDTTVKFVVRLSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMG
CLKRYDSVQDILREFYELRLTYYKLRKDWLLGSLGSEAAKLSNQARFVLEKIEGKIAIEN
KTKRELIRMLVQKGFELDPVVAWSKSQEKAQEEDYRDGNESDGSVDSGSTSGPNFNYILN
MPLWCLSKEKVDDLLKQRDHKRAELNDLQKKQPEDLWKEDLAVFIEELDKVELQEREEQS
LGKAVKLVKGKVGKPKAKKLNLEETMPSPFGRRVEPPTLAIRSDAAKKLSRKKKSDVEPG
VKLEFDEEGLPVEGGAAENAAAKPKAPRVKKEKKEPGAPRVRKTPAPKGTPVKKAKKRNP
WSEDESKSDSDAEDIQPVIPRETKSQRASASKPKYTFDFSEEEEEEEEEDADADGEENGG
AGDAASSPTRPFKDDFAASSEAKERYSDHKEEDDDDNEDNEDSYSAPQLKTTSAAPAAKK
KETTSIFSSKSAFSEKSNDSDGSKSDSDGGGDGGGRGFSTYSSSSAFDKLSQAKKAAKKP
SEAAAKPKKPPAPKAKKPDKSIWDSDSDTGSKKPAPAPAPAPAALKGKGRGRKRKGSGSE
DEYSPMKKAAKAAKPVGRKPQKPPPSDDDDDDSNGVGAASRDRPGRAKKEVKYFVESDNA
EEDDFDDMFN
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgccgcaggaagcacagggctggcgtggatggaggctgcgaatggtcga
ggtgatgccggcaagatggtggaagattccaagaaggccaaggcggcctccaagttgtcc
gtggagcgagtgtaccagaagaagacccagctggagcacatccttctccgcccggacacg
tacatcggcaccgtggagccgatcactcagcaaatgtgggtttttgatgaagaaatagga
atgaaccagagggagatcacctacgttcctggactgtacaaaatctttgatgaaattctt
gtgaatgcagcagacaacaaacaaagagacaagaacatgaacgcaataaagatcaccatt
gatccagagtccaacaccgtttctatctggaacaacggtaaaggaatccctgtggtggag
cacaaggacgagaagatgtacgtcccggctctcattttcggccacctgctcacctcgagc
aactacgacgacgacgagaaaaaggtcaccggtggaaggaacggctacggggccaaactc
tgcaacatcttcagcaccaagttcacagtggaaaccgcctgcaaggagtacagacacagt
ttcaagcagacgtggcagaacaacatgagcaagacgtctgagcccaagatcaagttcttt
gacggggatgattttacctgcgtgaccttccagccggacctctccaagttccagatggag
aaactggacaaggacactgtagctcttctgactcgcagagcatacgatgttgctggttcc
tgcaggggggtcaaagtcacgctgaacgggaagaaactacctgtgaccgggttccgcagc
tacgtggatctgtacgtgaaggataaactggacgagatgggcgtcgccctgaaggtggtg
aacgagactgtgaacgaccgctgggaggtttgcctcaccctgagcgagaaggggttccag
cagatcggcttcgtcaacagcatcgccacgaccaagggaggcagacacgttgactatgtg
gtggaccagatagtggccaaactcattgaagtggtgaagaagaagaacaaggccggagtg
acagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaacgcactgatcgag
aaccccacatttgactcccagaccaaggagaacatgacgctccagaccaagagcttcggg
tccaagtgtcctctctcggacaagttcatcagaggagcaaccaactgcgggatcgttgag
agtatcctcaactgggtgaagttcaaagctcagacacagctcaacaagaagtgctcgtct
gtgaagtacagcaagatcaaaggcatccccaagctggacgacgccaacgacgcaggtggc
aaacactctggcgaatgcacactcatcctcaccgagggggactcggccaagtcgctggcc
gtctccgggctgggagtcatcgggcgggatcgctacggggtgttccccctgaggggcaag
atccttaacgtgcgagaggcgacgcacaagcagatcatggaaaatgctgagatcaacaac
atcatcaaaatcgtgggcctccaatacaagaagagctatgaagaccccgagtcactgaag
agcctgcgctacggcaagatcatgatcatgactgatcaggatcaagacggctcgcatatc
aaaggtctgctcatcaacttcttccaccacaactggccgtctctgctgaaacacacattc
ctggaggagttcatcacacccattgtcaaagtaaccaagaacaagcaggagtcggtcttc
tacagcattccagagtttgatgagtggaagaaaaacacagagaactttaaaacttggcat
ataaagtactacaaaggtttgggaacgagcacaagcaaagaggcaaaggaatactttgcc
gacatggagaagcatcgcatttccttccggtacagcggggccgaggacgacgctgcaatc
accctggccttcagcaagaagaagacggatgaccggaaagagtggctgaccaacttcatg
gaggacagacgccagaggaggatgcacggcctgccagagcaatacctgtatggaactcaa
gccaggcacctctcctacaatgacttcatcaacaaagagctgattctgttctccaactcc
gacaacgagagatccatcccgtccttggttgacggtttgaagcccggccagaggaaggtg
ctgttcacctgcttgaagaggaacgacaagagggaagtgaaggtagcacagctggccggc
tcagttgcagagatgtccgcctaccatcacggagagcaagctctcatgatgaccatcgtc
aacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctcggtcag
ttcggcactcgcatcaacggaggcaaagacgccgccagccctcgttacatcttcaccatg
ctcagtccgctcgccaagctgttgttcccgtccggggattccaacctgctcaagttcctg
tacgatgacaaccagaaggtggagccggagtggtacattcccatcatcccgatggtgctg
gtcaacggagccgagggcatcgggacgggctgggcgtgtaagatccccaactacgacccc
cgagagatcgtcaacaacatcaaccggctgctcaaccaccaggatccgctgccgatgctt
cccagtggagggtacaaaaacttcaaaggggtgattcacgaactgggtcagaaccagtac
ctggtcagtggagaggtgttggtcattgacagaaacaccatcgagatcacggagcttccc
gttcggacttggacgcaggcgtataaggagtctgtgctggagcccatgctgcagggcaat
gacaaaacaccagctctcatctacgactacaaggagtatcacacagacacaacggtcaag
tttgtggtccgcttgtctgaggagaaactggctcaggccgaggcagtcggcctccacaaa
gtcttcaagctgcagtccagcctcacctgcaactcaatggtgctgtttgaccacatgggc
tgtctcaagaggtacgattcggtccaagacatcctccgggagttctacgagctccgcctg
acctactacaagctgaggaaggactggttactgggcagcctgggatccgaggcggccaaa
ctgagcaaccaggctcgctttgtcctggagaagatcgagggaaaaatagcaatcgagaac
aaaaccaaacgggaactgatccgcatgctggtgcagaaaggctttgagttggatccagtg
gtagcctggtccaagtcccaggaaaaggcccaggaggaagattaccgcgacggaaacgag
agcgacggctcggtggactcgggctccacgtcggggccaaacttcaactacatcctcaac
atgcctctgtggtgcctgagtaaagagaaggtggacgacctgctcaaacagagggaccac
aagagagcggagctgaatgatctccagaagaaacaaccagaggacctgtggaaggaggac
ttggctgtgttcatcgaggagctggataaagtggaactccaggagcgagaggagcagagt
ttaggaaaggccgtcaagctggtgaaggggaaggtgggcaaacccaaagcgaagaagctg
aacctggaggagaccatgccctcgccgtttggccgcagggtggagcctcccactctggca
atccgatccgacgcggccaagaagctgtccaggaagaagaagagtgacgtggagcccggc
gtgaagctagagtttgatgaggaaggtttgcccgtggagggaggagcagcagaaaacgct
gcggccaaaccaaaagctccacgtgtgaagaaagagaagaaagaacccggtgctccccga
gtgaggaaaaccccggcacccaaaggcacccccgtcaagaaggccaagaagagaaacccc
tggtccgaggacgagtccaagtcggacagcgacgccgaggacatccagcccgtcatcccc
agagagaccaagtcccagagggcctcagcctccaagccgaaatacaccttcgacttctcg
gaggaagaggaggaggaggaggaagaggatgcggacgcggacggagaggagaatggcggc
gccggcgacgcggcttcttctccgacgaggccatttaaagacgactttgccgcctcctcc
gaggccaaggagcgctacagcgaccacaaggaggaggacgacgacgacaacgaggacaac
gaggactcctactcggctccccaactaaagaccacgtccgctgcacctgcagctaaaaag
aaagagacgaccagcatcttctcgtccaagtcggccttctctgaaaaaagcaacgacagt
gacggctcaaagtctgacagcgacggcggcggcgacggcggcggccgaggtttctccact
tactccagcagctccgctttcgacaagctgtcgcaggcaaagaaagcagccaagaagccc
tcggaagcagctgccaagccgaagaagcccccagcaccaaaggcaaagaaacccgataaa
tccatctgggactctgactccgacaccggctccaagaagccagcaccagcaccggcaccg
gcaccggccgctctcaaaggtaaaggcagagggaggaagaggaagggctcaggctccgaa
gatgagtacagcccaatgaagaaagcagcaaaagcagcgaaacctgtcggcagaaaacct
cagaagccgccgccctcagacgacgacgacgacgacagcaacggcgtcggcgcggcgtcc
cgggaccggccgggccgggccaagaaggaggtgaagtactttgtcgagtcggacaacgcg
gaggaggacgacttcgacgacatgttcaactga
DBGET
integrated database retrieval system
