Pungitius pungitius (ninespine stickleback): 119219618
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Entry
119219618 CDS
T07626
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119219618
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119219618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
LRR_14
Ig_2
V-set
LRR_LRWD1
LRR_9
LRRNT
LRR_6
Motif
Other DBs
NCBI-GeneID:
119219618
NCBI-ProteinID:
XP_037330809
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All DBs
Position
17:complement(9038019..9042682)
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AA seq
608 aa
AA seq
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MFEGIAVHQRLSWGAVYLLAASVALSSETPPCPQSCRCDAALQQLNCSHGQLSRVPDSLP
QNAELLNLTHNKIKALVQQQFQSLPQLIDLDLSDNIMAIMEVEAFLGLERLMTLRLARNR
LKLIPVGVFAGLPKLKVLDISNNEILVFIDFTFRHLTALRFIKASDNDIVFISHQAFAGL
TSLQELHLDGCNLTAVPTEALTQLSGLRSLFFHQLGFATLQNYSFRQLGSLKELVITRCR
WLETLSGNSLFGLNLTSLTIKQCNLRVVPYIPLHHLVYLVYLDLSFNPITDIQGNLLGDM
LRLQELHLVGCLLVRIEIEAFKGLAHFKLLNVSGNLLTTLEAGAFQSVDNLRTLGLDNNP
LACDCRLLWVVPRRRNLDFGGNPPTCSTSVHLQGQYVLDFTEAELPGLLTCRQPRILNRK
PPEVKVDQGHTVVIYCIAEGDPVPSVTWLSPQLKTLSPIGRIRAVSNGSLEVRYAQPQDS
GTYLCVASNAAGNDSLTVSLHVPVFPSSGKKHFRLTGWFTFPSASPRVNGNQIITFDLKT
LLVVATIGLLSFFSSVSVCFIFMFFWSKSKGQIKHTATIAYVPRSTVASSNGGKGNSMEK
NRFTMKLI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggatcgccgtccaccaacggctgagctggggagctgtctacctcttggca
gcgagtgtggctttgtcatctgagacgccgccgtgtccacagtcgtgccgctgcgacgcc
gcgctgcagcagctcaactgctcccacggccaacttagcagagtccccgacagtctccca
caaaacgctgaactgctaaacctaacgcacaacaagatcaaggctctggtgcaacagcag
ttccaaagtttgccgcagcttatcgatttggatttgagtgacaacattatggcaataatg
gaagtggaagcatttctcggcctggaaagactgatgactctgcgtcttgctcgtaaccgc
ctgaagctcattcctgtcggcgtgtttgctggtttgccaaaactaaaggtactggacata
agcaacaatgagatccttgtttttatagattttacttttcgtcacctcactgcccttcgg
tttattaaagcgtcagataatgacattgtttttatctctcatcaagctttcgcaggcttg
accagtctgcaagagttgcaccttgatggctgcaacctcactgctgtgccgacagaggcg
ctcacacagctcagtggtttaagaagtcttttttttcaccaactgggcttcgccacgctg
caaaactactctttccgtcaactagggagcctcaaggaactcgtcattactcgatgccgc
tggctggagaccctgtcgggaaacagtctctttggcctaaatcttacgtctctaaccatt
aaacagtgtaaccttagagtggtcccctacatccctttacatcatcttgtatatcttgta
taccttgacctctcttttaacccaatcaccgacattcaagggaacctgcttggagacatg
ctcagactccaggagctccatctggtgggctgcttgttggtgcgtatcgaaatcgaagca
tttaaaggtttggctcatttcaaattgctgaatgtatctggaaatcttctcaccacactc
gaggcgggagctttccagtcagtggacaacctaagaactctgggacttgataacaaccca
ctagcatgcgactgccgtctgctgtgggtggtgccgaggcgacgaaatctggactttggt
ggaaatccaccaacttgctctacctcggttcatttgcagggacaatatgttctcgacttc
accgaagcggagctgccgggcctgctcacatgtcggcagcctcgaattctgaaccgcaaa
cctcctgaagtgaaagtagaccaaggacacacggtggtgatatattgcattgcagaaggt
gaccctgtgccatctgtcacctggttgagccctcagctaaaaaccctgtctcccattggt
agaatacgggctgtctctaacggttcgctggaggttcgctatgcgcaacctcaagacagt
ggtacttatctctgtgtggcatctaacgctgcaggaaacgacagcctgaccgtcagcctt
catgtcccagtctttccatcatccggtaaaaaacactttcgtctcacaggttggtttacc
tttccgtccgcctctccacgtgtcaatggaaatcagattatcacatttgatttaaagaca
ttattagtcgtggcaaccataggacttctttcatttttcagctccgtcagcgtatgtttc
atcttcatgttcttctggagtaagagtaaaggccaaataaagcacacagccacgatagct
tacgtcccgcgaagcaccgtggcaagcagtaacggagggaaaggcaactctatggagaaa
aacaggttcaccatgaaactaatttga
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