Pungitius pungitius (ninespine stickleback): 119219712
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Entry
119219712 CDS
T07626
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
ppug04148
Efferocytosis
ppug04218
Cellular senescence
ppug04310
Wnt signaling pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119219712 (nfatc1)
04310 Wnt signaling pathway
119219712 (nfatc1)
04020 Calcium signaling pathway
119219712 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119219712 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
119219712 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119219712 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119219712 (nfatc1)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
119219712 (nfatc1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
119219712
NCBI-ProteinID:
XP_037330974
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All DBs
Position
17:complement(2114309..2142249)
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AA seq
869 aa
AA seq
DB search
MKSAEEEAYGYTPNVSLSLPLGNPCLPSQYHSLQSSPIISVSVAEPLCYDAHDDMRAAGY
YSSPRPSGAPALESPRIEITAYGQFPEEEVEKSNLPVAKRLNSIVTLTLPSGDSYRDPSC
LSPASSISSRSCHSDASSYESSFSYNYDNSPQNSPWQSPSVSPKGSTLALPGDGGTSGCS
PRHSPSNSPRTSVSDDTWMGQRGSRPNSPCGAKRKYSFNGSGASHKHYPHSPNISPGRSP
HTSPRLSITEESWLPNTNQYTNSAILAAINALTTDGVVDLVEGIPTKARKTSSEQSPTVS
MKVEPEGEERRGELRQEDHSSNRPPLKKEGCSGVFLDVPQHPYSWSKPKQYVSPSLPALD
WQLPSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALGGGHPVVQLHGYTESEPLTLQL
FIGTADDRLLRPHAFYQVHRITGKTVSTPSHEALHNNNTKILEIPLLPENNMRAVIDCAG
ILKLRNSDIELRKGETDIGRKNTRVRMVFRAHIGQATGRTLSLQVSSNPIECSQRSAQEL
PLVDKRSLETCPAHGGDRMNIDGHNFQHDSKVVFVEKAQDGHHLWETEAKVDRDASKPNS
LLIEIPPYRSQRLSAPVHVNFYVCNGKRKRSQYQRFTYVPASAPTIKMEPRDDFDAPLLC
GQRGLSLQPKPYFPPQVMTQMMTSDLRPCPVGGPYPVGVEGKPPPLPASPSPSTSPKLHD
LSPPAFSALLPGAPQQVQPPAPRAPTSHVSIIQETPGRYQPPGFYPPSSSSSSSSPPTSQ
PSTPTDGPFSPAVCVTPVQTGGGDASPAGAQQHPKGPPRGRGSLQEDGSPPALAVNIKQE
PQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgccgaggaggaggcatatggctatacgccaaacgtcagtctctccctccca
ctgggcaacccgtgtcttccctcccagtaccacagcctccaatccagccccatcatatcc
gtctcggtcgccgagcctctctgctacgacgcccacgacgacatgagggcggccggctac
tattcgtcgccccgtccgagcggggccccggcgctggagagccctcgcatcgagattacc
gcttacggccagtttcccgaggaggaggtggagaagagcaacctccccgttgccaagcga
ctcaactccatagtgacgttgaccctccccagcggcgacagctaccgcgaccccagctgc
ctgagccccgccagcagcatctcgtcccgcagctgccactcggacgcctcctcctacgaa
tccagcttctcctacaactacgacaactcgccccaaaactcaccctggcagtcgccttcg
gtgtcgcccaagggctccactctcgccctgccgggcgacggcggcacctccggctgctcg
ccccgccactccccctccaactcgcctcgcacgagcgtgagcgacgacacctggatgggc
cagcggggctccaggcccaactccccgtgcggcgcgaagaggaagtacagcttcaacggc
agcggggcgtcgcacaaacactacccgcactctcccaacatctccccggggcggtccccg
cacacctctccccgcctcagtatcacagaggagagctggctgccaaacaccaaccagtac
accaactcggccatcttggcggccatcaacgccctgaccacggacggggtggttgacctc
gtggagggaatccccaccaaggcccgcaaaaccagctcggagcaaagccccaccgtcagc
atgaaggtggagccggagggcgaggagcgccggggggagctccgtcaggaagatcactcc
tccaaccgcccgccgttaaagaaggagggctgcagtggcgtgtttctggatgtgccacag
cacccatactcctggtccaagccaaagcagtatgtcagcccgtccctgcccgctctcgac
tggcagctcccgtccagctcggggccttacagcctgcagatcgacgtgcagccaaagtcc
caccaccgggcgcactacgagacggagggcagcaggggagctgtcaaggccctgggagga
ggacacccggtcgttcagctccacggctacacggagagcgagcctctgaccctgcagctg
ttcatcggcacggccgacgaccggctgctgaggccccacgccttctaccaggtgcaccgc
atcaccggcaagacggtgtccacgccgagccacgaggccctgcacaacaacaacaccaag
atcctggaaatcccactgctgccggagaacaacatgcgggccgtaatcgactgcgcaggg
atcttgaagttgcgcaactcggacatcgagctgaggaagggggagacggacatcgggcgc
aagaacacgcgcgtgaggatggtgttcagagctcacatcggccaggccacggggaggacc
ttgtccttgcaggtttcatccaaccccatcgagtgctcccagagatccgcccaggagctg
cctctggtggacaagcgcagcttggagacgtgtcctgcccacgggggggacaggatgaac
atcgacggacacaacttccagcacgactccaaagtggtgtttgtggaaaaggctcaagat
ggtcaccacctctgggagaccgaggccaaggttgacagagacgcctcgaagcctaactcg
ctactcattgaaatccctccgtatcggagccaaagactctccgctccggtccacgtcaac
ttctacgtctgcaatggcaagaggaaaagaagccagtaccagcgcttcacttacgtccct
gccagtgcgccgacgataaagatggagccacgcgacgacttcgacgccccgctgctgtgc
ggccagcgcggcctgtccctgcagcccaagccgtacttccccccgcaggtcatgacccag
atgatgacctctgacctcaggccgtgcccggtgggcgggccttaccctgtcggcgtggaa
ggcaagcccccccctctgccggcctcgccgtctccgagcaccagccccaagctgcacgac
ctgtcgccgccggccttctccgcgctcctccccggcgccccccagcaagtccaacccccg
gccccacgggcgccgacctctcacgtctccatcatccaggagacacccgggcgctaccag
ccgcccggcttctaccctcccagcagctcctcctcctcctcctcccccccgacctcgcag
ccctccacgccgacggacggccctttctctccggccgtctgcgtgacgccggtccagacg
ggcggcggcgacgccagcccggcgggggctcagcagcaccccaaggggcccccgaggggg
cgcggttccctccaggaggacggcagcccgccggcgctggctgtcaacatcaaacaggaa
ccgcaggagctggaccagatgtacctggatgatgtcaatgaaatcatcaggaacgacctg
tcgagcatctccgtccacagccacgcgtag
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