Pungitius pungitius (ninespine stickleback): 119219718
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Entry
119219718 CDS
T07626
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug02010
ABC transporters
ppug04145
Phagosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119219718
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119219718
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119219718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119219718
Enzymes [BR:
ppug01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
119219718
Transporters [BR:
ppug02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
119219718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_15
AAA_29
sCache_3_2
Motif
Other DBs
NCBI-GeneID:
119219718
NCBI-ProteinID:
XP_037330989
LinkDB
All DBs
Position
17:complement(4659574..4664691)
Genome browser
AA seq
720 aa
AA seq
DB search
MMTGEMAKITRKGVALVSAVCVDLSLFYAAGLVATRSVFGHFARLWVHAALRCSALSAVT
LLTLGDLNPLLIRVIASHSLLPAVFETGTKALYHEDTECGPAAGARCWLVCAAASLLAAL
FWEITVPDAEDAAAGDEKKQKARVLFGRVLGLYKPEYLLLFGGLVMLTLAVLCEMFIPFY
TGRVIDIRGTQYLPNEFVSALLFMGLYSLGSSFSAGCRGGFLLCAISAFTCRTKVQLFGA
LTKQEIGFFETTKTGEITSRLSKDTTLMGRAVCLNVNVLLRTFIKTLGMISLMMNLSWKL
TFLVLMEVPITSLIQNIYDTHYQRLSLAVHDSMALANEVANEVVSSIHVVRSFNTERHEA
RRYDDRLIDTHILKTRQNAVSAVYLLARRLTGLGMQVVMMYYGRLFIRSGQMTTGNLVSF
ILYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRKAQVSMEGKLKPDQLTGNVIFRN
VSFAYPTYPDKTVLQDFSLELKSGQMTALVGTSGQGKSTCVSLLQRFYEQQDGEILLDNE
PLRSYDHRFLHKKVALVSQQPVLFSGSIRDNIAYGLAECSLDEIQEAARKANAHDFIMKL
EEGYDAEVGEGGGQLSKSQRQQIAIARAVVRQPQVLILDEITSSLDMTSENKVHQALASC
PNQTLLVIAHKLRTIQRAHHIVVMDDGRVQERGTHQELMELKGSYYRLREELFEKENPAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaggtgaaatggcaaaaataacccgcaaaggcgtcgctttggtgtccgcagtg
tgcgtcgacctgtccttgttttacgcagcgggactggtggcgactcgcagcgtgtttggg
cactttgcgcgtctctgggtccacgcggctctccggtgctcggcactgagcgccgtgact
ctgctcaccctcggagatctcaacccgttgctgattcgtgttatcgcgtcgcacagccta
ctgcccgcggtgtttgagaccggaaccaaagcgctctaccacgaggacaccgaatgtggc
ccggcggcgggtgcgcgctgctggctcgtttgcgccgcagcgtcgctgctcgctgcgctg
ttttgggaaatcaccgtgccggacgcggaagatgctgccgccggtgacgagaagaaacag
aaggccagagtgctgtttgggagagtcctgggcttgtacaaacccgaatatctgctgctt
tttggggggctggtgatgctgacgctggcagttttgtgtgagatgttcatcccgttctac
actggcagagtcattgacattcgtggcactcagtatctgcccaatgaatttgtatctgcg
cttctattcatgggactttactctctgggaagctcttttagtgcaggctgcagaggaggt
ttcttactttgtgccatcagtgccttcacgtgcagaactaaagtccagctgtttggggct
ttgaccaaacaggagattggcttctttgagacaacaaagacaggggaaatcacatcacgg
ttgtctaaagacaccaccctgatgggaagagcggtctgtctcaatgtcaatgtgctgctg
aggacgttcatcaagacgctgggcatgatctccctgatgatgaatctttcgtggaagctc
acgttcctcgtattgatggaggtgcccatcaccagcctcattcagaacatctatgacaca
cactaccagcggctgtccctggcagtgcacgactcgatggctctggccaatgaagttgct
aacgaggtcgtgtccagtattcatgtggtacgtagcttcaacacagagagacacgaagcc
cgtcgctatgacgaccgcttgatagacacacacatcctgaagacccgccagaacgctgtc
agcgctgtttaccttctcgcacgcaggttgacaggcttaggcatgcaggtggtcatgatg
tactacggcaggctgttcatccggagcggacagatgaccactggaaacctggtttccttc
atcctctaccagtcagatcttggagacaacatcaggacactgacctacatctttggcgac
atgctgaactcggtgggggctgctgggaaagtgtttgagtacctggaccgtaaagctcag
gtcagcatggaggggaaactcaaaccggatcagctgaccgggaacgtcatcttccgcaat
gtcagcttcgcctatcctacttaccccgacaaaacagtactgcaggacttttcattggag
ctgaagtcaggtcagatgacagcgctggtgggaacatctggacaaggaaaaagcacatgt
gtgagtctgctgcagcgcttctatgagcagcaggatggagaaatcctattggacaacgaa
ccactgagatcctatgaccaccgattcctccacaagaaggttgctttggtgagccagcag
cctgtcctcttctctggctccatcagagacaacatcgcctacgggctcgctgaatgctca
ttggatgagatccaggaagcagcacgcaaagccaacgcacatgacttcatcatgaagctg
gaggagggctacgatgcagaggtaggtgagggtgggggccaactatccaagagccagagg
cagcagatcgccatcgctcgagctgtggtcaggcagccacaggtcctcattctggatgaa
ataaccagctctctggacatgaccagtgaaaacaaggttcaccaggctttggccagttgt
cctaaccagaccctgctggtgatcgcccacaagctgaggaccatccagagggcccatcac
atcgttgtgatggatgacggcagagttcaggagcgagggactcaccaggaactgatggag
ttgaaggggagctactaccgactgagggaggagctctttgagaaggaaaatccagcccag
tga
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