Pungitius pungitius (ninespine stickleback): 119219723
Help
Entry
119219723 CDS
T07626
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119219723 (prdm1b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119219723 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
zf-C2HE
TetR_C_28
Cpxcr1_C
Motif
Other DBs
NCBI-GeneID:
119219723
NCBI-ProteinID:
XP_037330999
LinkDB
All DBs
Position
17:complement(1367273..1378968)
Genome browser
AA seq
715 aa
AA seq
DB search
MKLESTLGDMSRWREVDFVLNCTYIVPDQVSDPSFSLPKAMTSIPRNLTFEYSTDNEVMG
VFSKEYIPQGTRFGPLQGVIYTKDNVPKQANRKYFWRIYSNEQLQNFIDGYDVHRSNWMR
YVNPARSLAEQNLVACQNGRDIYFYTIRPVEPNQELLVWYSQEFAQRLCSQQVDMKLKYT
NSDEEREPECPKQHLPQTTWLTDRTKEEVKEERDEDGEENIDVEMLERDTPPDTPDNQIM
DFSKKVEKESSVRDTEDRHTIPPPEPQHGERGLGSNHRYSLDPQPAEQRHLPLHLHGLYR
EGVSSYPIYPQSTPMEPNYQLLPPYGAHYPRLLLPSYSPPFPGMLPSRGYLRYNSYLSTD
GLPYPPIGQANLVPVSLPYPQPSQGSLKELKANVSPPRGAPATPELSPLPKADSQHRSTE
QAPSGFEEAMNLSLDTIKSKAATRNGPGHKSLPYPLQKQNGKIKYECNICSKTFGQLSNL
KVHLRVHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHL
RLHSGEKPYQCKLCNTKFTQYIHLKLHRRLHSSRDRPYRCQLCAQAFFHRFSLRIHQCSC
CAAESRAPVDAHMKQTVERFDASQEADMLTEAASAPQVEEAVERWLDRTLEGEGKEDQEE
ATLLLKALAAAIKSTATPAAQAATAASHHSPPLAYQERASVVHLHHRPTVKAEGQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaaagcacactgggagacatgagcaggtggagggaggtggacttcgtcctc
aactgcacctacattgtgccagaccaagtgtcggaccccagtttcagcttgcccaaagcc
atgacatccatcccacgtaacctcaccttcgaatacagcacagacaatgaggtgatgggc
gtcttcagcaaagagtacatccctcaggggactcggtttggccctctgcaaggggtcatc
tacaccaaagacaacgttcccaaacaggccaacaggaaatacttttggcggatttacagc
aatgagcagctccaaaactttattgatggctatgacgtccacaggagcaactggatgcgc
tacgtcaacccggcccggtctctggccgaacagaacctggtggcgtgccagaacggccgg
gacatctacttctacaccattagaccggtggagcccaatcaggagctgctggtctggtac
agccaggagtttgcccagaggctctgcagccagcaagtcgacatgaaactgaaatacaca
aactctgatgaagagcgagagccggagtgccccaaacagcacctacctcagacgacatgg
ctcacagacagaaccaaggaggaggtgaaagaagagagggatgaggatggagaggagaac
attgacgtggagatgttggaaagagacacgcctcccgacacgcctgataaccagatcatg
gacttcagcaaaaaggtggagaaggagtcgagcgtcagggatacggaagaccggcacacg
attccaccccctgagccccaacacggagagagaggcctgggctcaaatcaccggtactca
ctggatccccagcctgcagagcaacgacacctcccgcttcacctccacggcctctacagg
gaaggtgtttcatcctaccctatttacccccaatccacacccatggagcccaattaccag
ctcctacctccctacggtgcacactatcctcgcctcctcctcccctcgtactctcctccc
ttccctggaatgttgccctcacgaggatacctccgatacaacagctacctgagcaccgac
ggccttccgtaccctcccatcggccaggctaacttggtgccagtgtccctcccgtacccg
cagccttcacagggaagtctgaaagaactcaaagcaaacgtgtcgccgccacgaggcgca
ccagccacgccggagctctcccccctccccaaagcagacagtcagcatcggtccaccgag
caggccccctccggttttgaggaagccatgaacctaagcctggatacgatcaaaagcaaa
gcagcgacacgcaatggccccggccacaaatcgctgccatatccgctgcagaagcagaac
ggaaagatcaagtatgaatgtaatatctgctcaaagactttcggacagctgtcaaacctc
aaggtccacctccgagtgcacagtggcgagaggccgttccagtgtaacctttgtaaaaag
agcttcactcagctggcacacctccagaaacatcacctggtccacacgggggagaagcca
cacgaatgtcaggtgtgtcacaaacgcttcagtagcaccagcaacttgaaaacgcacctc
cgcctccactctggagagaaaccctaccagtgcaagctgtgcaacaccaagttcacccag
tacatccacctcaaactgcaccgccgcctccacagcagccgcgatcgcccctaccgctgc
cagctctgcgcccaggccttcttccaccgcttttccctgcgcatccaccagtgcagctgc
tgcgcggccgagtcccgcgcgcccgtcgacgcgcacatgaagcagacggtggagcgattc
gacgccagccaagaggctgacatgctcacggaggcggcgtcggcgccgcaggtggaggag
gcggtggagcgctggctggatcgcaccttggagggcgagggaaaggaggaccaggaggag
gcaaccctgctgctgaaagccctggcggcagccatcaagtcgacagcgacgccggcggcc
caggcggcgaccgccgcgtcgcatcacagccctccgctggcctatcaggagagagccagc
gttgttcacctccaccaccggccaacggtgaaggcggaaggacagtga
DBGET
integrated database retrieval system
