Pungitius pungitius (ninespine stickleback): 119219739
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Entry
119219739 CDS
T07626
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119219739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119219739
03021 Transcription machinery [BR:
ppug03021
]
119219739
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119219739
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119219739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
119219739
NCBI-ProteinID:
XP_037331025
LinkDB
All DBs
Position
17:complement(3338751..3383799)
Genome browser
AA seq
771 aa
AA seq
DB search
MFVPLPVPFVFQRTASDYSAWRLKSSLAPRSSPDIRMSKAAEEEKPGAEYPGDSSDSNRN
SPDDQVQPMKTSPFDVSPTRTISKGKSEESCEMIHTTTSPAPPTPPSQQQLQQQQQQQQQ
QQQQQQQLQQLQQLQQQQQQQQQQHHHTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQLL
AAAVQQSNAAHAAHAAHAAHAAAQQQANQQQQQQQQNQSQSQQQQQQQIKQEQTIQVPPP
QQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFLLSQPAQQQQGLLSSQNLIQL
PQQSPGGLLTTPPRMGLQAQREKSSDVGGSGSGASMVSTSSSGVVTSVGSTSASSSTMGS
SLTSGLTPGGHGGHMGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGVAMGKLYGNDFSQ
TTISRFEALNLSFKNMCKLKPLLEKWLSDAENMAVDSMLPSPSSLSSPMLGIEGLSGRRR
KKRTSIETNVRVALERNFHMNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPS
SSTTPPLTSQTSPIGTHKACYSPHMISSHGLSQVTTCLSTTAASSSAPCTMTPVSSATVG
SSSSSVTPPPHSTASPIPPTTGNTMMGVSTGMNQALIGSHPLATMQALAASSGQPPISGP
EGGAAHMLLGGPGCPTVPHSLRPSLFLNRPTLLPMGTGSMATPSTPAMGLVSGVGGCRPR
LSFCQSPPPGAGDLMSPTSCHEESASPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgactacagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatatcaggatgtccaaagca
gcagaggaggagaagcctggggctgagtatccaggcgacagttcagactctaacaggaac
agccccgatgaccaggtccagccgatgaaaacaagccctttcgacgtctcccccacacgg
actatcagcaagggcaaaagcgaggagagctgtgagatgatccacaccaccacctcccct
gctccacctacacctccctcccagcaacagctacagcagcagcagcagcagcagcagcaa
caacagcagcagcagcaacagctacaacagctgcaacagctacaacagcagcaacagcag
caacagcagcaacaccaccacacgcagctgatgctggcgggcagtcagctagcagggctt
gccgccctcctccctgcccagcagcagctgctcctccaacaggctcaggctcagctgctg
gcggccgctgttcagcagtccaacgccgcccacgccgcccatgcagcccacgccgcccac
gccgccgcccagcaacaggccaaccaacagcagcagcagcagcagcagaaccagtcacaa
tcgcagcagcagcaacagcagcaaatcaaacaggaacaaactatccaagtcccgcctcca
caacagctggccctgtctcagccaatccagctcacagcccaggatattcagcagctgttg
cagctccagcagctggttttgatgcccggtcatcctctccagtcacctgcacagttcctc
ctgtctcagccagctcagcagcagcagggtttgctctcgtcacaaaatctgatccagcta
cctcagcaaagcccagggggactactgacaaccccccctcgcatgggactccaagcacag
agggagaagagcagcgatgttggtggaagcggcagtggcgcttccatggtttccaccagc
agcagcggtgtcgtgacgtctgtaggatccacctcagcatccagcagcaccatgggctcc
tcactgacgtccgggttgacccccggaggtcacgggggtcacatgggcgaggagcccagc
gacctggaggagctggagcagttcgcccgcaccttcaaacaacgacgcatcaagctggga
ttcacccagggggacgttggcgtggcgatgggcaagctgtacggcaacgacttcagccag
accaccatctcccgattcgaagctctcaacctgagctttaaaaacatgtgcaagctgaag
ccgctgctggagaagtggctgagtgacgcagaaaacatggcggtagacagcatgctgccc
agcccttcttctctctcctcccccatgctgggcatcgagggtctgtccggccgacgcagg
aagaaacgcaccagcattgagaccaacgtgcgagtggccttagagcgcaacttccacatg
aaccagaagcctacctcggaggagatcctgctcatggccgagcagctcaacatggagaag
gaggtgatccgcgtttggttctgcaaccgcaggcagaaggagaaacgcatcaacccctcc
agcagcaccacgcctcccctgaccagccagacgtcgcccatcgggacacacaaagcctgc
tacagcccgcacatgatatcgagtcacggtctgtcccaggtcaccacctgcctcagcaca
acggctgcgagctcttcagcaccctgcaccatgactcccgtcagctctgccacagttggc
tcctcctcttcttctgtgactccaccccctcacagcacagctagccccatccctcccacc
accgggaacacaatgatgggagtaagcacagggatgaaccaggccctcattggcagccac
cccctggctaccatgcaagccctggcagccagcagcggccagccacccatctccgggcct
gaggggggagcggctcacatgctcctgggcggccccgggtgtcccaccgtcccccactcc
ctccgcccctccctcttcctcaaccgcccgaccctcctccccatggggactggctccatg
gcgacgccctcgacgcctgcaatgggactggtcagcggtgtcggcgggtgccgcccccgg
ctctccttttgccaatctccgccccctggagccggcgacctcatgagcccgacatcgtgc
cacgaggagtccgcttccccttgttcaagtcccgcttctttctgttccttcagcgaagcc
tcgccaccgcccctgggaggggccatggcagagtga
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integrated database retrieval system
