Pungitius pungitius (ninespine stickleback): 119219791
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Entry
119219791 CDS
T07626
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119219791 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119219791 (nup85)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119219791 (nup85)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119219791 (nup85)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119219791 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
119219791
NCBI-ProteinID:
XP_037331086
LinkDB
All DBs
Position
12:complement(10010702..10016802)
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AA seq
652 aa
AA seq
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MEEVDVEPAVTNIPAASDGNHLGFAWGPGDILVYETLYNTSGAKGSSCSFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIKEDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVST
KDAVVATQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKARD
VLQSESPAEHHDYWDVVVSYVLQGRLEEARQMLVKQAALQPAARSMYKLIDTLLSRMPFY
NPGGNQTLTEFDVKWRHWHDEVNRCLQDNSFASNRHLEIICKILAGDEDTLLEHKELLST
WYHFLVTRLLFSHPTVKPTELHYYAQSCLTMFLDSRSVPEPLDNILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDHCPEFGHVYLELQIERVPLDTERKALKVLRICDQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISERFLQDYCTRGTFSDLDLIDNLGPAMLLSDRLTFLGKYRE
FHKLYGEKRFGEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMFC
LEELTSSLNTSALGSAKTSQDEDIELTKVELLRLSLARNLAMAIIKEGTVEV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtagagccggcagtcacaaatattcctgcagccagtgatgggaac
catttgggatttgcatggggtccaggtgacatccttgtgtatgagaccctctacaatacg
tcaggtgctaaaggatcgagctgttccttcatccacgaagtcaggaaagatgaggatata
tattccccaattttacgcaaactcttcaatgagtcacatcacatctttgttggcctgcag
acaattaaagaggacctccccagcaagaacaaaaaaccccaatttgtcagcatcagtaaa
aattacagatctgtgatacgagcttgtatggaggaacttcagcaagttgcagtttctaca
aaagatgcagtcgtagccacgcaatatggaaaccaggtttccattctgttggccatagaa
ctgatctggaatctgtgtgaagtgctcttcattgatgctgctcctgcgggttccctgttg
ctccacctccttgactgggttaggttacacaaggctgatgtggatgagaaggccagagat
gtgctgcagagtgagagcccggctgagcaccacgactactgggacgtggtggtgagttat
gtgctgcagggcaggttggaagaagccagacagatgctggtgaagcaggccgccctgcag
cctgccgccaggagcatgtacaagctgattgacacgttgctcagcaggatgcctttctac
aatcctgggggcaatcagacgctgacggagtttgacgtcaagtggagacactggcatgac
gaggtgaaccgctgcctgcaggacaactcgtttgccagcaatcgtcacctggaaatcatc
tgcaagatcctagcgggggacgaagacacgttgctggagcacaaggagctactgagcacc
tggtaccacttcctggtcactaggctgctctttagccaccccacagtcaaacccacagag
ttacattactatgcacagtcatgcctgacgatgtttctggactcgaggagcgttccagaa
cctttggacaacattttactggctgcttttgagtttgacattcatcaggtcatcaaggac
tgcagcattgctctcaacaactggtggttcgtggcccatttgacggatctgttggatcac
tgcaaactcctccagtctcacaatctgcactttggctccaatttgagagagttcctcctg
ttagaatatgcttctggtctctttacgcatcacagtctgtggcagttggcagtggactac
tttgaccactgcccagagtttggccacgtctacctggagctgcagatcgagcgggttcct
ttagacaccgagcgcaaagccctcaaggtgctccggatctgtgaccagaggcagatgtcc
gaacaagtgcgcagtatctgcaagatcatggctatgagggccctgcggaacaacagactg
ggctctgctctctcctggagcatcagggccaaagacgctgcctttgccacgctcatttca
gagaggtttctacaggattactgcaccagggggaccttctctgatttggacctgatcgac
aacttgggtccagcaatgctgctcagcgacaggctcactttcctcgggaagtatcgggag
ttccacaagctgtacggggagaagcgcttcggcgaggcagccaagctgctcctctccctc
atgacggccaagatcgccccccgcagcttctggatgacgctgctgaccgacgccttgccg
ctgctggagcagaaagaggtgatcttctcggcagaccaaacccacgagctgatgttctgc
ttagaggagctcacctcctccctgaacacctcagcgctcggctcagctaagacctcgcag
gatgaagacatcgagctgaccaaagtggagctcctgagactctcgctggcccggaatctg
gccatggcgattattaaagaaggaaccgtggaagtgtga
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