Pungitius pungitius (ninespine stickleback): 119219909
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Entry
119219909 CDS
T07626
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04020
Calcium signaling pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119219909 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119219909 (grin2ca)
04082 Neuroactive ligand signaling
119219909 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119219909 (grin2ca)
Ion channels [BR:
ppug04040
]
Ligand-gated channels
Glutamate (ionotropic)
119219909 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119219909
NCBI-ProteinID:
XP_037331309
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All DBs
Position
12:complement(929876..967692)
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AA seq
1418 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPPPPPLLLLLLVLCGGPHCSGRPFGVPAPSVNVAVVFSGSAYQA
EIKGRLSRENFLDLPLEVNPITVLVNNTNPRALLTRICDTLSANRVHGVVFEDNVGSEAV
AQILDFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDS
FVVITSLYPGYESYVDYVKSFTDTSYFTWELQDVLTFDMSADGMNDVRARRLLQQIDAQV
LLVYCSHEEAQYLFTMAAESRLVGPGYIWILPSLAVGNPDIPPPESFPVGLIGIITDRWR
MSLRKRVRDGVAIVVKGVQSFRRQRGFVPEGHSDCLNPSRPPAANDTLFRHMLNVTWEHN
DFSFNSNGYLVNPAMIIITLDRERLWDKVGTYEMGIMQMRYPVWPRYGSYLEPVSDYRHL
TVATLEERPFVIVEAVDPQTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDIL
KKLSRTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDF
SVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGY
NRSLVSAKEPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLAS
YTANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSH
MVKYNQRGVEDALNSLKTGKLEAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIA
LQKDSRWKRLIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYML
LVAMGLSLLVFAWEHLLYWKLRHSVREAERLNFLLAISRGIYSCFNGVEHTDHSGSMPSP
DVTANYTQANMLKMLKTAKDMVSSARVENSLDNATKTIENWSRRGVDNVRLGLPPRVTAA
DVTHGRLPYISSITDNHSPYSQRALTPTFPLHYGDATTQPLLEKPCVVTRPNALRYTLPA
RNAHHLMERTLPISSLSSPHIAMRDPSPSAASNPHHAGRLYVENPARRPTSPFAPYREFQ
VPDIYVEHKGPLRRKFSYPPDCVSRRRRSHGYTFDAADPRARGDYDEPRPCLAELRANHL
LSNHAPVGAARACAPGHYAGGSASCNSCMKSYLEPEMDDMPLLGKDKLNRRASFLKATWG
NDRIHQVDETKASTSASSARVDMPDLFPRVVVANPKPNKLYGSLGHNLSCYPLAAEPAYL
DPAHMGSYPYKQKLKYTESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPV
YVGPLAQRPAQFYDGSKDVCHLFPCASHCPGNAAMLPRMGDRQVVYHNNMFGACDATGKR
EEPGSGGRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctgggctgtttgagcgactccccgtggtggccgccgcccccgcccccg
ccgctgctgctgctgctgctggtgctctgcggcggcccccactgctccggccggccgttc
ggggtccccgcgccctccgtcaacgtggcggtggtcttcagcggctcggcctaccaggcg
gagatcaaggggcggctcagccgggagaacttcctggacctgccgctggaggtgaacccc
atcaccgtgctggtgaacaacaccaacccgcgggcgctgctcacccgcatctgcgacacg
ctgtccgccaaccgcgtgcatggcgtggtgttcgaggacaacgtgggctccgaggccgtg
gcgcagatcttggacttcatctccacgcagacggccgtgcccatcgtggggatcagcggc
ggctccgccgtcgtgctgccgtacaagggcgagggctccaacttcctccagctgggctcc
tccatcgagcagcagatcaacggcatgttcaaggtgatggaggagtacaactgggacagc
ttcgtggtcatcaccagcctgtacccgggctacgagagctacgtggactacgtcaagtcc
ttcacggacaccagctacttcacgtgggagctgcaggacgtgctgaccttcgacatgtcc
gccgacggcatgaacgacgtgcgggcgcggcggctgctgcagcagatcgacgcccaggtg
ctgctggtctactgctcccacgaggaggcgcagtacctcttcaccatggcggccgagtcg
cggctggtggggcccggctacatctggatcctccccagcctggcggtggggaacccggac
atccccccgcccgagagcttccccgtgggcctcatcggcatcatcacggaccgctggagg
atgagcctgcggaagagggtgcgggacggcgtggccatcgtggtgaaaggcgtgcagagc
ttcaggagacagaggggcttcgttcccgagggccacagcgactgcctcaaccccagcagg
ccgccggccgccaacgacacgctgttcaggcacatgctgaacgtgacgtgggaacacaac
gacttctccttcaacagcaacggctacctggtgaacccggccatgatcatcatcactctg
gaccgagagcgcctgtgggacaaggtggggacctacgagatggggatcatgcagatgaga
tacccggtgtggccgcggtacggctcctacctggagccggtgtcggactacaggcacctg
acggtggccacgctggaggagaggcccttcgtcatcgtggaggcggtggacccgcagacc
ggcacctgcgtcagcaacaccgtgccctgccgccggcagtccaacaagaccgaaaccatt
gtgggtcacaccgagccctacaccaagctgtgctgtaaaggcttctgcatcgacatcctg
aagaagttgtcccgcaccataaagttctcctacgacctctacctggtcaccaacggcaag
cacggcaagctggtccgaggcatctggaacgggatgatcggagaggtgttctacaagcgg
gcggacatggccatcggctcgctgaccataaacgaggagcgctccgagatcatcgacttc
tcggtgccgttcgtggagacgggcatcagcgtgatggttgccaggagcaacggcaccgtc
tcgccgtcggccttcctagagccgtacagcccggcggtctgggtgatgatgttcgtcatg
tgtctcaccgtggtggccatcacggtcttcgtctttgagtactgcagtccggtcggatac
aaccgcagtctggtcagtgccaaagagcccgggggccccaccttcaccatcgggaagtct
gtgtggctgctgtggggcatcgtcttcaacaactcggtgcccatcgagaacccgaagggc
accaccagcaagatcatggtgctggtctgggccttcttcgccgtcatcttcctggcctcc
tacacggccaacctggcggccttcatgatccaggagcagtacatcgacaccgtctccggg
ctgagcgacaaaaagtttcaaaagccgcaggagcagtaccccccgttccgcttcggcacg
gtcccgaatggcagcacggagcgcaacataaggagcaactaccccgagatgcactcccac
atggtcaagtacaaccagaggggcgtggaggacgccctcaacagcctcaaaaccgggaaa
ctggaggccttcatctacgacgccgccgtcctcaactacatggcgggcaaagacgagggc
tgcaagctggtgaccatcggcagcgggaaggtgttcgccaccactggctacggcatcgcc
ctgcagaaggactcgcgctggaagcgactcatcgacctggccctgctgcagttcctggct
gatggcgacacccagaagctgcagaccgtctggctcacgggcatctgccgcaacgagaag
aaggaggtgatgagcagcaagctggacatcgacaacatggcgggggtcttctacatgctg
ctggtcgccatgggcctcagcctgctggtgttcgcctgggagcacctgctctactggaag
ctgcgccactcggtccgcgaggcggagcggctgaacttcctcctggccatcagcagaggc
atctacagctgcttcaacggggtggagcacaccgaccacagcggcagcatgccgagtccc
gacgtcactgccaactacacacaagccaacatgctgaagatgctgaagacggccaaggac
atggtgtcctccgccagggtggagaactctctggacaacgccaccaagacaatagagaac
tggagcaggcggggggtggacaacgtgcggctcggcctgcccccccgagtgacggcggcg
gacgtgactcacggccgcctgccgtacatctccagcatcacggacaaccactcgccgtac
tctcagagggccctgacccccaccttcccgctgcactacggggacgccaccacccagccc
ctcctggagaagccctgcgtggtgacccgacccaacgcgctccgctacacgctgcccgcc
cgcaacgcgcaccacctcatggagcggaccctccccatctccagcctgagcagtcctcac
atcgccatgcgggacccgtccccctccgccgcgtccaacccccaccacgccggcaggctg
tacgtggagaacccggcccggcgcccaacgtccccgttcgctccctacagggagttccag
gtgcccgacatctacgtggagcacaaggggcccctgaggaggaagttcagctacccgccg
gactgcgtcagccggaggaggcggtcccacggctacacgttcgacgccgccgacccccga
gccagaggcgactacgacgaaccgcggccctgcctcgccgagttgagggccaaccacctc
ctgagcaaccacgcccccgtcggcgccgccagggcgtgcgctccgggacactacgccggg
ggcagcgccagctgcaactcctgcatgaagtcctacctggagcccgagatggacgacatg
ccgctgctggggaaggacaagctcaaccgccgcgcctccttcctcaaggccacgtggggc
aacgacaggatccatcaggtggacgaaacaaaggcctccacctccgcgtcctccgcccgc
gtggacatgcctgacctgtttcctcgggtggtggtggccaacccgaagcccaacaagcta
tacggcagcctgggacacaacctgtcctgctacccgctggctgcagagcctgcgtacttg
gacccggcccacatgggctcctacccttacaagcagaagctcaagtacaccgagtccacc
aggctgccctcttacagggaggccatcctgcagaacgccgccgccctgcgccgctcctcc
tccacggtggtgcacagacactactccacctacctgaactcgtacacagacttgccggtg
tacgtggggccgctggcccagagacccgcccagttctacgacggctccaaggacgtgtgc
cacttgttcccctgcgccagccactgcccgggtaacgcggcgatgctgccccgcatgggg
gaccggcaggtggtttaccacaacaacatgttcggggcctgcgacgccacggggaagagg
gaggagccgggctccgggggccgagagcggaggcaggtgttggtggcgcgcagagtcaac
agcccctacgtgccaaagccctggggcagggtgtccagcctggagtccgaggtctga
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