Pungitius pungitius (ninespine stickleback): 119219922
Help
Entry
119219922 CDS
T07626
Name
(RefSeq) cysteine protease atg4da-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04136
Autophagy - other
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119219922
04136 Autophagy - other
119219922
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119219922
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119219922
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119219922
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
119219922
Membrane trafficking [BR:
ppug04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
119219922
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119219922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
119219922
NCBI-ProteinID:
XP_037331329
LinkDB
All DBs
Position
12:19206078..19211346
Genome browser
AA seq
463 aa
AA seq
DB search
MNPNDASARCEDGSVDDPMDDWLFLSTDSVVRAEVSEENPEAEDRGPLKTKLISVWNSVK
YGWSLKHKSKFSKSSAVIMFGQSYELRDHDERENFRRSFAAVLWLTYRRGFPQLAGASLT
SDSGWGCVLRTGQMLLAQGLLLHQVPPGCTRCVGYHAVKDDLDLPSACPADAARRGLAAK
EGPNRMGRNLSLDSLMDRPKEAPLRRVVSWFADCPTAPFGIHKLVELGKSSGKKAGDWYG
PSIVAHILRKAVAASAALPDLVVYVAQDCTIYLEDVKRLCERPPPQAWKAVIILVPVRLG
GQELNPSYITCVKKLLSLQCCIGIIGGKPKHSLFFIGFQDDHVLYLDPHYCQPTVDVTRD
NFPLESFHCKYPRKMAFCRMDPSCTIGFYAKGQKDFESLCTDVNEALSISAETYPMFIFA
EGKGQEEEREGTNVVQNNIAYIQRKNERRRVDTSNSMDEFVLL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccaacgacgcctcggctcgctgtgaggacggctctgtcgacgacccgatggac
gactggctcttcctctccaccgactccgttgtccgtgcggaggtgagcgaggagaacccg
gaggccgaggaccgaggcccactcaaaaccaagctgatctctgtgtggaacagcgtcaaa
tatggctggtccctgaagcacaaatccaaattcagcaagagctctgctgtgatcatgttc
ggccaatcgtacgagctccgggatcacgatgagcgggagaacttccgccgctccttcgcg
gccgtcctgtggttgacgtaccgacggggtttccctcagctggccggcgcctctctgacc
agcgacagcggctggggctgcgtgctgcgcacgggccagatgctgctggctcagggactc
ctcctacaccaggtgccaccaggttgcactcggtgcgtgggctaccacgccgtcaaagac
gacctggacctcccatcggcttgccccgcggacgccgcgcggcgtggactggccgcaaag
gaagggccgaacaggatgggtcgaaacctgagcttggattccctcatggaccggcccaag
gaggcccctctgaggagggtggtgtcgtggttcgcggactgccccacggcccctttcggg
attcacaagctggtggagctgggcaaaagctccgggaagaaggctggcgactggtacggc
ccgtccatcgtggcacacatcctccggaaagcagtggcagcatcagcggcccttcccgat
ctagtcgtgtatgtcgcacaagattgcaccatctacttggaggacgtcaagaggttgtgc
gagcggcctcctcctcaggcctggaaggctgtcatcatcctggttcctgtgcgacttgga
ggacaagagctcaacccctcctacatcacctgtgtgaaaaaactgttgagtttgcagtgc
tgcatcgggatcatcgggggcaaacccaagcactctttgttcttcatcggcttccaggat
gaccacgtgctgtacttggaccctcactactgtcagcccacggtggatgtgaccagggac
aactttcctttggagtcctttcactgtaaatatcccaggaaaatggctttctgtcgcatg
gaccccagctgtaccatagggttctacgccaaaggccaaaaggactttgaatccctgtgc
acagacgttaatgaggctctctccatatctgcagaaacgtaccccatgttcatatttgct
gaaggaaagggtcaggaggaggaacgggaaggaaccaacgttgtccaaaacaatatcgcc
tacatccagaggaagaatgaacggagaagagtcgacaccagcaacagcatggacgagttt
gttctgctgtga
DBGET
integrated database retrieval system
