Pungitius pungitius (ninespine stickleback): 119219996
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Entry
119219996 CDS
T07626
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00310
Lysine degradation
ppug00514
Other types of O-glycan biosynthesis
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119219996 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119219996 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppug01003
]
119219996 (colgalt1a)
Enzymes [BR:
ppug01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119219996 (colgalt1a)
Glycosyltransferases [BR:
ppug01003
]
O-Glycan biosynthesis
O-linked Gal type
119219996 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
119219996
NCBI-ProteinID:
XP_037331432
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All DBs
Position
12:complement(6271611..6278498)
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AA seq
610 aa
AA seq
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MLGLACLPAALLALLLSGCAPARAYFAEERWSPESPLLAPRLFLALICRNAEHSLPYFLG
TIERLNYPKERMALWVATDHNKDNTTAILRDWLVKMQSLYHNVEWRPKEEPQHYRNEDGP
KQWTDLRYEHVMKLRQVAMDSARERWADYFMLADCDNLLTNPDVLWKLMQENKTIVAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPIRKQLRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHAEYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEADSFLHSL
LDVNVRNPPVMPSKYIRVPRKQPDKLGFDEVFMINLQRRTDRRQRMMRALYEQRIDCKVI
AAVDGKATNISEIHAMGIHMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVERRLHTSL
VIEDDLRFEIFFKRRLMNLMREVEEEGLDWDLIYIGRKRMQVDHPEKAVPNIHSLVEADY
SYWTLGYMISLQGAEKLMKAEPLKKILPVDEFLPIMYNKHPVPAYMEHFETRDLKAFSAE
PLLVYPTHYTGDQGYVSDTETSTVWDNDKVRTDWDRARSGKTGEQAEISTEAQNSDVLQS
ALDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggctcgcgtgcctccccgccgccctgctcgccctgctgctgtccggctgcgct
ccggctcgcgcgtacttcgcggaggagcgctggagccccgagtccccgctcctcgcgccc
cggctcttcctcgcactcatctgcaggaacgccgagcactctctgccctacttcctcggc
accatcgagcgcctcaactaccccaaggagcgaatggctttgtgggtagcgactgatcat
aacaaggacaacaccacagccattctgcgggactggcttgtcaagatgcagagcctgtac
cacaatgtggagtggaggccaaaagaggaaccacaacattatcggaatgaagatggtccg
aagcaatggaccgacctccgttatgagcatgtcatgaagctgcgtcaggtagccatggat
tcagctcgtgagaggtgggcggactactttatgttggcggactgcgataacctcctcacc
aaccccgatgtgctctggaagctcatgcaagagaacaagaccatcgtcgcacccatgctt
gaatcccgtgcagcctattcaaacttctggtgtggaatgacctctcagggttactataag
cgcactcccgcctacatacccataagaaagcagttgcgcaagggctgttttgcagttccc
atggtgcactccactttcctgatagacctcaggaaagaagcgtccaggcagctggccttt
cacccgccacacgcagaatacagctgggcctttgatgacatcattgtgtttgcgttctcc
gctcggatggcagatgttcaaatgtttgtatgtaataaagagacctatggttacttccct
gtgccactgcgatcccacaatactttgcaagatgaagctgacagcttcttgcactccctg
ctggatgttaatgtgcgaaatcccccagtgatgccttccaaatacatacgtgtacctaga
aaacaacctgacaaactgggctttgatgaggtgttcatgataaacctgcagaggcggacc
gaccgcagacaacgtatgatgagggctttgtacgagcagaggattgactgtaaggtcatt
gcagctgtagacggaaaagcaacaaatatcagtgaaattcatgctatgggcatccacatg
ctccctggatataaagatccctatcatggtcgcccactgacaaagggagagctgggatgc
ttcctttcccactataacatctggaaagagattgtggagcgacgcctgcacacctccctt
gtgattgaagacgacctgcgctttgaaatcttcttcaagcggcgcttgatgaacttgatg
agggaggtggaggaggagggattggactgggatctcatttatattggacggaagagaatg
caagtggatcaccccgagaaagctgtgcctaatatacacagcctcgtggaggctgactat
tcgtattggacactaggctacatgatatcgttacaaggtgcagagaagctcatgaaagca
gaaccactcaaaaagattttgccggtggacgagtttcttccgatcatgtacaataagcat
cccgtgcctgcttatatggaacattttgaaaccagggacctgaaggcattttcagccgag
ccgcttcttgtgtatccaactcactacacgggcgaccaaggctacgtcagcgacactgag
acgtccacagtgtgggacaacgacaaggtccgcaccgactgggacagagcgcgctcagga
aagactggcgagcaggccgagatcagcactgaagcccagaactcggatgtgctccagtcg
gctttggacagtacagcacgggacgagctatga
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