Pungitius pungitius (ninespine stickleback): 119220019
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Entry
119220019 CDS
T07626
Symbol
nr5a5
Name
(RefSeq) nuclear receptor subfamily 5, group A, member 5 isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119220019 (nr5a5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119220019 (nr5a5)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
119220019 (nr5a5)
Nuclear receptors [BR:
ppug03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
119220019 (nr5a5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
RseA_C
Motif
Other DBs
NCBI-GeneID:
119220019
NCBI-ProteinID:
XP_037331486
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All DBs
Position
12:6090784..6094286
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AA seq
544 aa
AA seq
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MDRPDYHPQQPLVHHLGKYPFILDGSSTSQELKAEPDGTPESQESCPICGDKVSGYHYGL
LTCESCKGFFKRSVQNNKYYTCAEQRSCPINLLQRKRCPFCRFQKCLAVGMKREAVRADR
MRGGRNKFGPLYRRDRQIKQQKVYHQPNPASSRMKMQTMQTQRPTAPNDHHVLSNHTSAV
LSSDALYESNMCTSGIGPSGAPSPLDCTMNADRVFSPLSPPYSGLYQRTFPGYLQERAET
PYSYSQAPTNYVHPTLDNSFTTRSPPASSPCSKPSSSTPLSQTHSPTLDETSLATLRPNL
LNQLLAGEPDESQLCAKVLASLQREQANRGKHDRLNTFSIMCKMADQTLFGLVEWSRNSA
LFKELKLEDQMALLQSCWSELLVLDHLCRQVTYSKEGCIYLVTGQQPSLLLMQIEVSTIV
SQAGMALSSLVSRTQDLVSKMKAFHLDTHEFVCLKHLVLFNPDVKSVQSRKQVEQTQQRV
NRALMEHTQQSHPRQSDKFGQLLLRLPEVRSISFQLEEYLYQRHLLGDLPCNSLLAEMLH
TKYS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacctgactatcaccctcagcagccacttgtccaccaccttggcaagtacccc
ttcattttggatggatcatcaacatctcaggaattaaaagcagaaccagatggcacacca
gagtcacaagagagctgtcccatctgtggagacaaagtgtcaggataccactatggactg
ctcacttgtgaaagctgcaagggcttctttaaacgctcagtgcagaataacaagtattac
acctgtgcagaacaacggagctgccctattaaccttttgcagaggaaacgctgtcctttc
tgccgttttcaaaagtgtttggcagtgggcatgaagagagaagcagtaagagcagatcgc
atgagagggggaaggaataaatttggccccctgtaccggcgggacaggcaaataaaacag
cagaaagtgtatcaccagccaaaccctgcttcctccaggatgaaaatgcaaactatgcaa
acacaacggcccacagctccaaatgaccatcacgtattgagcaatcacacaagtgcagtg
ttgtcctcagatgctttatatgagtccaacatgtgtacctctggcatcgggccatcgggg
gctccatcacctctggactgtaccatgaacgcagacagggtgttttcccctctctcgccg
ccctactctggactgtaccaacgcaccttccccggatacctccaggagagagcagaaacg
ccctatagctacagccaagctccgactaactatgtgcacccaactttggacaattcgttc
acaacaagaagcccaccagcctcatctccctgctcaaaaccaagctcatccaccccgctc
tcacagactcacagcccaaccctcgatgaaacgtcactggcgactcttagacccaacctg
ctcaatcagctcctggcaggagagccggatgagagccagctgtgtgcgaaggtcctggca
agtctgcagagagaacaggccaaccggggcaagcacgaccgcctgaatacattcagcatc
atgtgcaaaatggcagaccagacactgtttgggcttgtggagtggtctaggaacagcgca
ctattcaaggagctcaagttggaggaccagatggcgctgctccagagttgttggagtgag
ctactagtgctggatcacctctgtagacaggtgacctacagtaaagagggctgcatatac
ctggtcacagggcaacagccatctctccttctgatgcagattgaggtgtcgaccatcgtc
tctcaagcaggaatggcactgagtagcctggtatcaaggacccaggacttagtatccaaa
atgaaggcatttcacctggacacacacgagtttgtttgtctaaaacacttggtgcttttc
aaccccgatgtgaagtcagtgcagagccgcaagcaggtggagcagacacagcagagggtg
aacagggccctgatggagcacacccaacagagtcatccaagacagtcagacaagttcggc
cagctgttgctacgacttcctgaagtacgcagcatcagcttccagcttgaggagtatttg
taccagcgacatcttctgggagacttaccatgcaactctctgctcgcagagatgctgcac
accaagtacagctga
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