Pungitius pungitius (ninespine stickleback): 119220051
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Entry
119220051 CDS
T07626
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119220051 (ap5z1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
119220051 (ap5z1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
119220051
NCBI-ProteinID:
XP_037331564
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Position
12:12128770..12135313
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AA seq
816 aa
AA seq
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MYSHGSESLIKQAREIQEPELQRFHSRLVKLLQGKELGHEAVDSLQRLHIILSATKYTRT
LPPELQKSLQSLLSSPAEQFQVLSSAVLRETLPLSGQEENYCQENFIQLNNHAAALVLSQ
AGSRAELSSLCAQLLRSLEGRQSEGPATSLTHILPILNTILTHSPESLTEDHVTLMSKKL
VDWLRYASITQGGSAPSGGFFTGPRPRQPVPIAELDGTVSGDFFTVLCVGQSFTEDQWLN
VYSFSMLRHWLLTYRCVSNGNNTADTANRLQLSLSLSFSNDDRSEVDGSVVSMVSATSSS
SRLLPPKERLREKAFQYCQRLIEQSDRKAHKKTDTDLQKACLVEAVCILDSVCGEDASLV
FRAFPCIKALFGRLSSDLSFARVLLPIAQFYLNHGEMAAVDCESVWNLVFGRFPAELFDH
QFLAHEFLRFIRLNLESLQLRVPQYPHSFPNLLKFLAWDSPAVVDDFVDLLPSLVTAGTA
VELLHTLLDLPCLSATLVLQVRSTCLPISEPSGRGLLSLDAFRSQSFRGLFLFLLRGEAG
SGDTIDRLSTLHEMLTETADWPRVVQCAQTVPVLLHIFFNTVIAIADQKLLAHLVQVMLE
RSTLLLNIPKYNKEIHRVFSRHLLLLCKLHPSVVVDQSHELLEFAGATANVYSKEEIYTH
VVWVLGEYLSVSCDSRCSVMLITSCFETLEAVLFEITSSAPPPGADCPVPRAVTSLMSAL
AKLASRSHDLIPRVSLFLSKLRTVTRGGPVAWCSDEEDLVAIVTRGEELWSLLKAPGVAQ
SVLTPPQPVTTPQWHRDTNVALPLQLRALTNLTHSQ
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtactcacacggttcggaaagtttaattaaacaggcaagagagatccaggagccggag
ctgcagcggttccacagcagactggtcaagcttctccagggaaaggagctcggccacgag
gctgtcgactccctgcagaggctgcacatcatactctctgctaccaagtacaccaggacg
ttgcccccggagcttcagaagagccttcaatccctcctttcgtccccagcggagcagttt
caggtgctgagctccgctgtgctcagagagacactgcctctctctggccaggaagagaac
tactgccaggaaaacttcattcaactgaacaatcatgctgctgccctggtgctctcacag
gctggatccagggctgagctgtcgtcactttgcgctcaactcctccgcagtttggaaggc
cgacaatcagaagggcccgccacgtcactcacgcacatcctgccgatcctcaacaccatt
ctcacacacagcccagagagcctcactgaagatcacgtgacccttatgagtaaaaagctt
gtggattggttgcgttatgccagcatcacgcagggaggcagtgctccctcaggggggttc
ttcacagggccccggccccgtcagccggtaccaatagcagagctggatgggacggtctca
ggggatttcttcactgtgctctgtgtgggtcagagtttcactgaggaccagtggttgaac
gtctactccttctccatgcttcgccattggctcctcacctaccgctgtgtttccaatggc
aacaacacagctgacactgcaaacaggctgcagctcagcctctccctatccttttctaat
gatgacaggtcggaggtggacggatcggtggtttccatggtttcggcgacgtcctcctcc
agccgattgctgcctccaaaggagcgccttagagagaaggctttccagtactgccaacgc
ctcatcgaacagagcgatcgcaaggcacacaaaaagacggatacagacctgcagaaagcg
tgtctggtggaggcggtgtgtatcctcgacagtgtgtgtggggaggacgcctcgctggtc
ttccgagcgttcccgtgcatcaaggcgctctttggtcggctcagctccgacctgtcgttt
gccagagtgctgctgcccatagctcagttctacctcaaccacggagagatggccgctgtg
gattgcgagagtgtgtggaatctggtttttggacgattccccgccgagctgtttgaccac
caattcctggcgcacgagttcctacgcttcattcggctgaacctggagagcctgcagctc
cgagtcccacagtacccccactcctttccaaacctgctgaagttcttagcgtgggacagc
ccggcagtggtggatgactttgtggatctgctaccttctctggtgacggctgggactgcg
gtggagcttcttcacactctgctggacctgccctgtctctcggccacgctggtgttgcaa
gtcaggtcgacttgtttgcccatctctgagccgagcgggcgcggcctcctctcacttgat
gcattccgaagccaatccttccgagggcttttcctcttcctgcttcggggggaagcaggc
tcaggtgacacaattgacagactgagcacgctgcatgagatgcttactgagaccgctgat
tggccgagggttgttcagtgtgcccagaccgtccctgtgctgctgcacatttttttcaac
acagtcattgcgatagctgatcagaagcttttagctcacttggttcaagtgatgctggag
agaagcaccctcctcctcaacatcccaaaatacaataaagagatacacagggtgttcagc
aggcacctgctgttgttgtgcaagctccacccgtccgtggtggtggaccagtctcacgag
ctgctggagttcgctggggccacggccaatgtgtacagcaaagaggaaatctacacgcac
gtggtgtgggtgctgggagagtacctctctgtgtcgtgtgactctcgctgctccgtgatg
ctcatcacttcctgttttgagacgttggaggcggtgctgtttgagatcacttcatctgcc
ccaccccccggagcagattgccctgtcccgagagccgtcacctctctaatgagcgcactg
gctaagctggcgtcacgatctcatgacctcataccaagggtgtctctgttcctctccaag
ctcagaacggtaaccagaggtgggccagttgcctggtgctcggacgaagaggacctcgtt
gccatagtaactcgaggtgaggagttgtggtcgctgctgaaggctcccggtgtggctcag
agcgtcctgaccccaccccaacctgtcaccacaccccagtggcacagagacaccaacgtt
gctttgcccctgcaactgcgggccctaaccaacctcacacactcccagtga
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