Pungitius pungitius (ninespine stickleback): 119220052
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Entry
119220052 CDS
T07626
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04136
Autophagy - other
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119220052 (wipi2)
04136 Autophagy - other
119220052 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119220052 (wipi2)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119220052 (wipi2)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
119220052 (wipi2)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119220052 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
DUF7165
BCAS3_WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
119220052
NCBI-ProteinID:
XP_037331566
LinkDB
All DBs
Position
12:12145146..12151470
Genome browser
AA seq
426 aa
AA seq
DB search
MNLASQSGDAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKMATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKYVPAEEPTTWGGYLGKVLMASTTYLPSQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYMYNLDPQEGGECTLMKQHRLD
GSAEPANEILEQSHDRPLMAQTYSAAATKGYCEEQGAVGGAGLEDDLNDLRLEEENEQPP
LILETD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggccagtcaaagcggggatgctggcggaagccagcttctcttcgccaacttc
aaccaggacaacacgtccttggctgttggcactaaatcaggatacaagtttttctccctg
tcctctgtggacaaattggagcagatatatgaatgtacggacacggaggatgtgtgcatc
gtggagcgcctgttctccagcagcctggtggccatcgtgagcctaaaagcgcccaggaag
ctcaaagtctgtcacttcaagaagggaaccgagatctgcaactactcctattccaacact
atactggcagtcaagctcaacagacagaggctgatagtgtgtctggaggagtccctttac
attcacaacatccgtgacatgaaagtgctgcacaccatcagagagactccacccaaccct
tcaggattgtgcgccctttccatcagcaacgataactgttacctggcgtacccgggcagc
gctacaataggagaagtccaggtgttcgacacagtcaacctgcgagccgctaacatgatt
ccggcccacgacagcccattagcagctctggctttcgacgccagtggaaccaaaatggcc
acggcctcggagaagggcacagtcattcgagtcttctccatcccagagggacagaagctc
tttgagtttcggagaggagtcaagaggtgtgtgagcatttgctcgttggcgttcagcatg
gaagggctctacctgtctgcttccagcaacacagagacggtccatatcttcaaattagag
acgcagaaggagaagtatgtgccagcggaggagcccaccacgtggggagggtacctgggc
aaagtcctgatggcgtccaccacctacttgccttctcaggttacggaaatgttcacccag
gggcgagccttcgctaccgtacgtctgcctttctgtggacataagaacatctgcgcctta
gctgtaattcagaagattccaaggttgttggtggcagctgctgatggctacctgtatatg
tacaacttggatccacaagagggaggggagtgcacacttatgaagcagcacaggttggat
ggcagtgctgagccagccaatgagatccttgagcagtcacatgaccgccctcttatggcc
caaacctacagtgctgctgccactaaaggttactgtgaagagcagggagccgtgggaggg
gcggggctagaagatgacctcaacgacctgcgcctagaggaagagaacgagcaaccgcca
ctcatccttgaaactgactga
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