Pungitius pungitius (ninespine stickleback): 119220070
Help
Entry
119220070 CDS
T07626
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119220070 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119220070 (gtf2f1)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119220070 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
119220070
NCBI-ProteinID:
XP_037331602
LinkDB
All DBs
Position
12:10829563..10834800
Genome browser
AA seq
533 aa
AA seq
DB search
MTSLGSSSSSSSTEYTVRVPKNNSKKYNLMAFNSGDKVNCSTWTQARMERDMSARRIYGE
EEAAEGAAGSEFGKKQREESRRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVT
ENASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQ
RRFREQERGGEDDDDENDKSGKKKKKGGRKGGDLRIHDLEEDLEMSSDDSDSSVGDDGEA
KTKGKKDSGKGKAKKKKRKSSDKDALEDSDDGDYEGLEVDYMSDESSSDEEPEKAKQSKG
EDHPKGIDEASESEEESEEEKPNEEETKEEEEEEEGKKTPVQTEKKKKKDSSGESETSDD
SDIDGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSSTLRAAASKLEQG
KRPTAGPSTDSPAAKRLKMEPSSQSPAPSGKTTPQPPSGKSTPSSSDVQLTEEAVRRYLI
RKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactggggagcagcagtagttcctcgagcacggaatacaccgtgcgggtcccc
aaaaacaacagcaagaagtacaatctcatggctttcaattcgggagacaaagtcaactgt
tcaacctggacacaggctcgtatggagagagacatgagtgcccgacggatatatggggag
gaagaagcggcggaaggtgcggctggcagtgagtttggcaaaaagcagcgcgaggaatca
cgccggaagaagtatggtattgtgactcgggagttcaaagtggaggaccagccctggatt
ctaaaagtcaatggcaaggccggcaagaggttcaaaggtataaaaaagggcggtgttaca
gaaaatgcctcctactacatctttacacagtgtcccgatggagctttcgaggcttttccc
gtccacggctggtacaactttacaccgcaggccaaacaccgaactctcactgctgaggag
gctgaggaggagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcag
agacgtttccgggagcaggagcgtggtggtgaggacgatgacgatgagaatgataagtcg
gggaagaagaaaaagaaggggggcaggaaaggtggagatctgcgcattcacgacctggag
gaagacttggagatgagcagcgatgacagtgacagcagtgtgggggacgatggagaggca
aagacaaagggaaaaaaggattcggggaaagggaaagcaaagaagaagaaaagaaagagc
agtgacaaagatgccctggaggacagcgatgacggtgactacgagggtctagaggtggat
tacatgtcggatgaaagcagttcagacgaagagccggaaaaggcaaagcaaagcaaagga
gaggatcatcccaaagggatcgatgaggcatctgaaagtgaggaagagagtgaggaggag
aaaccgaacgaagaggaaacgaaagaggaggaggaggaagaggaaggaaagaagacgccg
gtccaaacggaaaagaagaagaaaaaagacagcagcggcgagtcggaaacctccgacgac
agtgacatcgacggagagaccgcctccgctctgttcatgaagaagcgcacgccccctaaa
cgtggtgggcgcggctctgcaggcagctccaggactggcagtcgccccggcacaccgtcc
atcgactcggcctccacctccagtacactccgcgctgctgccagcaagctagagcaaggt
aagagaccgactgcaggtcctagcactgactccccggctgccaaaaggctcaaaatggag
cccagcagtcagagcccagccccctctgggaagaccacgccccaaccgccatcaggcaaa
tccactcctagctccagtgatgtgcagctgacagaggaagcagtccggcggtacttgatc
cgtaaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacgggtttg
agcagcgagcagaccgtcaatgtgctggcgcagatcctgaaacgcctcaatccggagcgc
aagaatgtcaacgacaaaatgcacttctacctcactgaataa
DBGET
integrated database retrieval system
