Pungitius pungitius (ninespine stickleback): 119220082
Help
Entry
119220082 CDS
T07626
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119220082
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
119220082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
119220082
NCBI-ProteinID:
XP_037331625
LinkDB
All DBs
Position
12:complement(9613438..9625343)
Genome browser
AA seq
2222 aa
AA seq
DB search
MQSFRERSGGYHSNQPCYQQETHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGPVHS
RTGYEAHSLVNPTSMAPTGGAGTGGGPKDCYSQQAYPGYPGNSGGNGSGNGGSPPSQAKK
AYRGSKVPPPNPSQHLQGPGSYANQMGPGSYSAPYISEGQLQQKWEDSAQLAQYDQELVG
RIEAGGTSTPGSSQYIDQNMLGHSQTQCHQPSTPAYTSPHHQAHPPNPAPSPLIYPQSHL
HYPQHSASPSPYMEKCSPMPHCYKGYSIPPNPQYSRQMSSHSNLKQGGYRSTPNSYGYQQ
PSSRVYEQQPPLQAMTNPQEPHPKYQHYSQPQQSYCLSELSVRSPEQYYQTCSPSSSHSP
ARSVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGPASSSSSSSAGMQEQTSTNNMLMPPR
SHPSPNVPHAAPHSYTPTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLL
SEALVANKKSGKRSSGGSNSSVGSGASIKKVEEYKGPPYPDGGGSVGGGPMQDPYSTPQH
QPMPMELHEGGYSSSSDEQLERGYYYCGQGRSPAQAPSNTQLSLDTASSCSMTSPDDMST
RSGDSGLHNLTPDPNRSHSGQGRDGMNTPVKGIGDERSPISITIPSPMKQERDSPLDIQQ
IIEPVKENFEESAWTEKSADKEEVSTDKSPDSERDSDTAKSTDNLEKWSDEEKCPALYSK
VYKGMTEQIYCYKETRYQTVQSKYDPDTQDSVVQSPAALSDSSHKEHFGPEMKSEAFKSE
SPTASESSVKTLPFISRGDLEQDQYSTEKEDSSDNTSLTPQVEALDESNSDKRESKDVED
EEEDESAPDEAGEEGEIQKQKHALSPTLSLDVGEELEDGEEDSSSEDHINRHGQEMLFGD
LSSRADSTALHTDTKSAGAPAHPNAAAAAAGASARESAIGDTAPQPQSAMPVFSALNDKT
PATQARDRIDHNDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDMEPGISCASAV
TPLAKPGPVAPSAQPRAFGRKHARGRRKIIHSSVGIRQQLNLESEGGGEEEGALSPRQKP
CMPPIKTLLFSDPMNQAHLESIVSQTPKMLTDGFRSRMCTRSFNAPDTPPKVEPHVKRKP
GPKPGSKPGLKPGPKPGTKSGPKTGQKPGPKPGLKQCLKPGPKPLSKPGTKPGPKPGPKP
VPNESELLQNIETPVKRKPGPKPGLKTGSKSGSKSGLKSSPKPALKPGHKPGPKPAEVLP
LDDTVPIKASVGRPKGSVSKTKQVQEEETIQPLTGLQSKVRKSPKASISQVTLDVKPVNH
DEKQANHEVKAPCKDGKNMVLRSRKPSQEKLAKEKVTEEDILTQTLTEIKATDDSPKVEE
HLTMEEASTSTPNAVKNVDIPANAPVLTETSEGKSLFPLKRKPSPEMSTTPAKKKRGPKP
KPKSSLTLEEKASSTQKGKGVLGPRKKRGPPNNVSVVIPPPKDIPPNISEMDITSDVPVV
APQCPTKTKVLPPRKGRGQKYEAMVQKITSPSSKKHLPIPPMDSNLCDDVTVKALPQLVL
KEGEPTMLINNIEVIEGEVKSIDSRQEVLEQPEEALRKKNMSQEREKHEVSREALTAEDC
RQGMEKLILNKEEIRQEHIKPEIQHEVTADQVWSSLEVPAEVKSLGVWTQQASKSVSSAP
KSAKSTRTKRKRWAMVESTDASIVALEAGSLIVTTPRLAKQRAIKNNHEMHLKQKRKKRK
GQAPHEETEAVEEKNSETVEQQQQKVEETVTPTASSIPLPISADEITEAPQVTSTELVQK
PRRGRKPSTNPTQRKRGKASAEQIPGKPMKVHKKPGPKPGMKDAMEVIEAVVRAAGCERA
VKEEREKEEVERRERETKEKAVSSIEGPSVTTSEKQMEIISLKRIRRKPVHQTSKLSFCP
YVRINNSRDFSSWCAIVNKPEDAVVFQRRRKKGILRMRNPFTVAKVVPHAAAMLQGPLVK
RDLIDRCLTCCLCGKPANFRDLGDLCGPYYTEDGVPRKLLTVGPTESIREDPQKTNEANR
SRSEEPSSSKNEGEGSTEKEGNTETTTQEGSNSRHHWHYRRAERTERVGQKGGPRRVTLR
ERFRRMKQLQAISAAASSDQEGGDSMFERLQMEAEAKEHWAHENCAIWTKGVIMVAGRLY
GLREAANNSAQTSCYKCQDVGASLSCCWRGCSHKYHYVCAKEIGCTFHEDDFSIKCPKHE
DL
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcggtggttaccacagcaaccaaccctgctaccagcag
gagacccacgaattatcccgcctggagacctaccgacaacatccgcatcatccccacccc
cagcacccgcacccggggcccggtccacatccaggccctggccctggcccagtgcacagc
agaacaggctatgaggctcattcactggtgaatcccacaagcatggctccaactggagga
gcaggaactggaggaggacccaaggactgttacagccagcaagcctaccctggttaccca
ggaaacagtggtgggaatgggagtggaaatgggggctcaccaccctcgcaggcaaaaaaa
gcctacagaggaagcaaagtgcccccaccaaacccaagtcagcacttacagggtcctggg
agctacgctaaccaaatgggccctgggagttattcagccccgtatataagtgagggccaa
ctccagcagaaatgggaagactctgcccagttagcacagtatgaccaggagttggtgggg
cgcatagaggctggtggaacatctacacctggctcctcccagtacatagaccaaaatatg
ctgggccactcccagacccagtgccaccagccctccaccccggcctacacaagcccccac
catcaggcccatccccctaaccctgccccctcccctctgatttacccccagagtcacctt
cactacccccagcactcagcttctccttcaccatacatggaaaagtgcagccctatgcca
cactgttataaaggctacagcattcccccaaatccccagtacagcagacaaatgagcagc
cacagcaatctgaagcaggggggttacaggtcaactcccaacagttatggctaccagcag
ccttcctccagagtttatgagcagcagccccctttacaagccatgaccaacccccaggag
ccccaccctaaataccaacactacagccaaccccaacaaagctactgtctatctgagcta
tctgtcagatcaccagaacagtattatcagacttgtagcccctcctcaagccactctcca
gcacgatctgtaggacgctccccctcgtacagttccaccccttcaccactaatgacaaat
ccagagtcattccagtatggccaacctcccatgacccctgggccagcctcctcttcttca
tcctcttcagctggcatgcaggagcaaaccagtacaaataatatgttgatgccccctcgc
tcacacccctcacccaatgtgccccatgccgctccacacagctacacccccacaccgcag
gtccccaccatgaaagaacgtttctctgaaaagttattgtcaaaccccagcttgtggagc
ctgaatgccctcacctctcaggtagagaacatctctaataatgtacagcagttgctgctt
tcagaggccctggtggccaacaagaaaagcggtaagcgcagcagtggaggtagcaacagc
agtgttggaagcggagcatctatcaaaaaggttgaggagtataaaggacctccataccca
gatggaggtggtagtgttggtggaggccccatgcaagacccttactctaccccgcagcac
cagccaatgcccatggaactccacgaaggaggctattctagcagtagtgatgaacaactg
gagagggggtactactactgtggacagggcagaagtccagcacaggcccccagtaacaca
caactcagcctggatacagcctcatcatgctccatgacatcaccagatgatatgtccacc
aggtctggagactcgggtctacacaaccttacccctgaccctaatagaagtcactcaggc
caaggaagggacggcatgaacactccagtgaagggcattggcgatgagaggtcccctatc
agcattacaatccccagtccaatgaaacaagaaagggattcccctttagatatacaacaa
atcattgagcctgttaaagagaactttgaagaatcagcctggacagaaaaatctgctgac
aaagaggaggtatctacagataaatctcctgacagcgagagagattcagacactgctaaa
tctacagataatctggagaaatggtcagatgaggaaaaatgtccagccctctacagtaaa
gtatacaaaggaatgacagaacaaatctattgctacaaggagacaaggtatcaaacagtt
cagagcaaatatgaccctgatacacaagactcagtcgtacagtctccagcagctctttcc
gactccagccacaaggaacactttggccctgagatgaaatccgaggcgtttaaatctgag
tctccgactgcatcggagagctcagtgaaaacattgcctttcatttcaaggggtgacctt
gagcaagatcaatattccacagagaaagaggacagctctgacaacacctctctaaccccc
caagttgaagccttggatgagagcaactcagacaaaagggagagcaaagatgtggaggat
gaagaggaggatgagagtgcaccggacgaggcgggtgaagagggagaaatacagaaacaa
aaacatgctctttccccaactctttcattagatgttggggaggaactggaggacggtgaa
gaagattcatcgagtgaggaccacattaacagacatgggcaagagatgttgtttggtgat
ctttccagcagggcagatagtacagcgctccatacagacaccaagtctgcaggggcgcct
gcccatccgaatgcagccgcagcagcagcaggtgcttctgcaagagagtcagccattggg
gacactgctcctcagcctcagtctgctatgccagttttctcagctctcaatgacaagaca
cctgcaactcaggctagggatcgtattgatcacaatgatgcgaaagtgctggagccagac
tctcctcagctgccagggaagtcaatacttccctcagccccttcctgggcagatactcct
ccctcccccaaaaaaggcgacgaagacatggagcctggcatcagctgcgccagtgcagtg
accccattggccaagccaggacccgtggccccatctgctcagccgagagcatttggacgt
aagcatgcaaggggcagaagaaagattatccattcaagtgtaggaatcaggcaacagcta
aacttggagagtgagggtggaggggaagaggaaggagccctctcgcctagacagaaaccc
tgcatgcctccgataaaaactctgctattctcagatccaatgaaccaagctcatcttgaa
tctattgtgagccagacgcccaaaatgctaactgatggttttcgttcgaggatgtgcact
cgctcattcaatgcaccagacacgccacctaaagttgagcctcatgtgaagcgaaaacca
ggcccaaagccaggttcaaaacctgggctgaaaccagggccaaaacctggaacaaagtca
gggccaaaaacaggacaaaagccaggtccaaaaccagggctcaaacaatgtcttaagcct
ggaccaaagcctttgtcaaaacccggaacaaaaccaggacctaaaccaggaccaaaacct
gtgccaaatgagtcagagcttctccagaacattgagacacctgtgaaacgtaaaccagga
cccaagccaggtttaaaaactgggtcaaaatctggatcaaaatccggactaaaatctagt
ccaaaaccagctctaaaaccaggacataagcctggacccaagcctgcagaggttttgccc
cttgatgacactgtccccattaaggcctcagtgggtcgccctaaaggctcagtttctaag
acaaagcaagtacaagaagaagaaaccattcaacctttgacaggactgcaaagcaaggtt
aggaaaagcccaaaagcttcaatatcacaagtaactcttgacgttaaaccagtgaaccac
gatgaaaaacaggcaaaccacgaggtaaaggctccatgcaaggatggtaagaacatggtt
ttaagatccagaaaaccctcacaagaaaagctggcaaaagaaaaagtcacagaagaagat
attcttacccagacactaacagaaatcaaagctactgatgattctccaaaagtagaggaa
catcttactatggaagaagcttcaacttctactcctaatgctgtcaaaaacgtagatatt
ccagcaaacgcaccagtcctaactgaaacatctgaaggaaagtctttgtttccattgaaa
cgtaaacctagcccagaaatgtctacaacaccagcaaagaaaaagaggggtccaaagccc
aaacccaaatcctcactaactctggaagaaaaggcttcttctacacaaaaagggaaaggt
gttcttggtcccagaaaaaagagagggccacccaataatgtatctgtggtcattccccca
cccaaagacattcctccaaacatcagtgagatggacatcactagtgatgtgcctgtggtg
gctcctcaatgccccactaaaacaaaggttctccccccacgcaaaggcagaggacagaaa
tacgaggccatggtgcagaaaattacatccccaagctcaaagaaacacctcccaattcct
ccgatggacagcaatctatgtgatgatgtgacagtcaaggctttgcctcaacttgtctta
aaggaaggtgagccaacaatgctcataaataacattgaagtgatagagggagaagtgaaa
agcatagattctagacaggaagtactggaacaacccgaagaagcattaagaaagaagaat
atgtcacaagaaagagaaaagcatgaggtgagtcgggaagccttaacggcagaggattgc
agacaaggcatggaaaaactgattttgaataaggaggagataagacaagaacacattaaa
ccagagatacagcatgaagtcacggctgaccaggtttggagctcattggaggtcccagct
gaagtcaaatctctaggagtgtggacacaacaggcctcaaaaagtgtatcgtcagctcct
aagtctgctaagtctacgagaactaaaaggaagagatgggccatggtggagagcacagat
gcctcaatagtagccttggaagcagggagcctaatagttacaacgccaaggttagcaaag
cagcgggccataaaaaacaaccatgagatgcatctaaaacaaaagagaaagaaacggaag
ggccaagcccctcatgaagaaacagaggcagttgaggagaaaaatagtgaaacagtagaa
caacaacagcagaaggtagaagagacggtaacccccacggcgtcctcaatacctttgcca
atcagcgcagatgagatcactgaagccccccaggtaaccagcacagaactcgttcagaaa
cctaggagaggaagaaaaccatccacaaatccaactcagaggaaacgaggcaaggcctca
gcagagcagattcctggaaagccgatgaaggtccacaaaaagcctgggcccaaacctggg
atgaaagatgccatggaggttattgaagcagtagtaagagcggcgggatgtgaacgggcc
gtaaaagaggagagagaaaaagaagaagtggagagaagagaaagagaaacaaaggaaaaa
gcagtatcaagtatcgagggtccttcagtaacaacatcagaaaaacagatggagatcatt
tctttaaaaagaatcaggcgcaaaccagtccatcagacttctaaactgtctttctgtcct
tatgttcgaattaacaactccagagacttttcttcttggtgtgccatagtgaacaagcct
gaggatgcggtggtgtttcagcgacgtagaaaaaagggcatactcagaatgaggaatcct
ttcacagttgcaaaagtcgtgccacacgctgctgccatgctacaaggacccttggtgaaa
agagatctcattgacaggtgccttacatgttgcctgtgtggaaagccggcaaatttcaga
gacttaggggatttgtgcggaccttactacacggaggatggcgttccgcggaaattgctg
accgtcgggcccacagaatccatcagggaagatcctcagaaaacaaatgaggcaaacaga
agcagaagtgaagaaccaagctcctcaaagaacgagggcgagggcagcacagaaaaggag
ggcaataccgagaccaccacccaagagggaagtaatagcaggcaccattggcactaccgg
cgggcagagagaacagagagggtgggtcagaagggtggtcctcgaagagtaactctccga
gagaggttcaggagaatgaagcagctccaggctatcagtgcagcggcctcaagtgaccaa
gagggtggggacagtatgttcgagaggctacaaatggaggcagaggctaaagagcactgg
gcccatgaaaactgtgccatctggaccaagggggtaattatggtagctgggaggctatat
ggactgcgggaggctgccaacaactcagcccaaacgagctgctacaagtgccaggatgtg
ggggcgtccctcagctgctgttggagaggctgctctcataaatatcactatgtctgcgcc
aaagagataggctgcacattccacgaggatgatttctccataaaatgtcctaaacatgag
gacctgtaa
DBGET
integrated database retrieval system
