Pungitius pungitius (ninespine stickleback): 119220143
Help
Entry
119220143 CDS
T07626
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04136
Autophagy - other
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119220143 (wipi1)
04136 Autophagy - other
119220143 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119220143 (wipi1)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119220143 (wipi1)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
119220143 (wipi1)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119220143 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_HPS5
WDR55
BCAS3_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119220143
NCBI-ProteinID:
XP_037331748
LinkDB
All DBs
Position
12:complement(14832703..14841974)
Genome browser
AA seq
457 aa
AA seq
DB search
METGDGADGPGGPDAPGMQFGCASFNQDSTSLALGTKTGYKLFSLTMVEMLDCIHESVET
PDVYIVERLFSSSLVVVVSTAMPQRMNIYHFKKGTEICNYSYPNSILAVKLNRHRLVVCL
DESIYIHNIKDMKLLKTLLNTPSNPSGLCALSISHSNSYLAYPGSATIGEIVVYDANNLN
TVTMIPAHDSPLAALAFNASATKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISS
LSFSPDGQFLCASSNTETVHIFKLEQLGPSGEDETGTWTAYVGKMFSAASSYLPAPVSGM
MSQDRAFATVHLVTLGQRNICTLAMIQKLPRLLVATADGQLFIYNVDPLDGGECMLAHKH
RLFGTDDDQDEVAKTEGSEVPGPVQTCPSYAATAALPASGPVTATLTGYSEDGGAKKGEV
IPEHEFAAGPVCLDDENEFPPINWCRGGTGGGQARPS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagacaggagacggtgccgacgggcctggcgggccggacgcacccgggatgcagttc
ggctgcgcctctttcaaccaagactccacatccctggctctgggaacaaagactggctac
aagctgttttctctgaccatggtggaaatgctggactgtatccatgagagtgtagagacc
ccagacgtctacatcgtagagcgcctgttctccagcagtctggtagtcgtagtgagcacc
gccatgccacagcgcatgaacatctaccacttcaagaaggggacggagatctgcaactac
agctatcccaacagcatcctggctgtcaagctcaacagacataggctggtagtgtgcctt
gacgagtccatttatatccacaacatcaaagacatgaagctgctcaagacactgctcaac
actccatccaacccgtcaggtctctgtgcgctttctatcagccattccaactcctacctg
gcgtacccaggcagtgccaccatcggggagattgtagtatatgatgccaacaatttgaac
acagtgaccatgatcccggctcacgacagtcctctggcagccctcgccttcaacgcctca
gccaccaaactcgccagtgcctcagagaggggcaccgtcatccgagtgttctccataccc
gaggggctgcgtctgtttgagttccgccggggcatgaagaggtatgtcaatataagctct
ttatccttcagccctgatggtcagttcctctgtgcgtccagcaacacagagacggtgcat
atctttaaactggagcagttgggaccaagtggagaggacgagactggcacgtggacagcc
tacgtggggaagatgttctcagcagccagcagctacctccccgctccggtgtccggcatg
atgagccaggaccgggccttcgccaccgtccacctggtgaccttgggccagaggaacatc
tgcaccctagctatgatccagaagcttccgcggctcctggtggctacagctgacggccag
ctgttcatctacaacgtggatccactggatggaggcgagtgcatgttagcccacaaacac
aggctctttggcactgatgatgaccaagacgaagtcgcaaagacggaagggtcagaggtc
ccagggccagtgcagacctgtccatcctacgctgcaaccgctgccttaccagcctctggt
cctgtcactgcaactctcactggatactctgaggatggcggtgcaaaaaaaggcgaagtc
attccagaacacgagttcgctgctggacccgtgtgtctagacgatgagaacgagtttcct
cctattaattggtgtcgaggcgggactggaggtggccaggccaggccctcgtga
DBGET
integrated database retrieval system
