Pungitius pungitius (ninespine stickleback): 119220177
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Entry
119220177 CDS
T07626
Name
(RefSeq) integrin alpha-3-like isoform X1
KO
K06482
integrin alpha 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119220177
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119220177
09142 Cell motility
04820 Cytoskeleton in muscle cells
119220177
04810 Regulation of actin cytoskeleton
119220177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119220177
04515 Cell adhesion molecules [BR:
ppug04515
]
119220177
04090 CD molecules [BR:
ppug04090
]
119220177
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119220177
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin alpha subunits
119220177
CD molecules [BR:
ppug04090
]
Proteins
119220177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
119220177
NCBI-ProteinID:
XP_037331843
LinkDB
All DBs
Position
12:135576..160732
Genome browser
AA seq
1066 aa
AA seq
DB search
MCVNMATGVVALLSAWVGVCAAFNLDTAFSLLKTGGDGSLFGLSVALHQDLKKGSYLLLV
GAPREKAETNVPANRTGGVYSCPISADQSECSRLKLIDPNVNLSEDLIEDMWLGVSVASQ
GRPGGRVLACGHRFVKLYGALKLRHMIGRCYLRGNDLQYDVTDIHWQNPDQPCSHLGDVS
SEVMCNVGISASITQTEVIVGSPGSYEWQGNVHISWMNPHVVFDTQRTFFPNLQHRNIYT
GYSVTQAHRLLSQHDETIVTGAPKDSKDDARGSVLLAVKQSDKLKTQQTLRGEQTGSYFG
NAVATTDLNNDGWNDLLVGAPFYFHRQQEAGGAVYIYMNRQGRFDSLPSVVLRGPSGSAF
GMAVAAAGDLNQDGFQDFAIGAPFYETGSVMIWLGSHVGASTQPSQVILGSKVSPLFRTF
GYSLSGGLDVDGNKYPDLLVGSLDDTVALLRTRPVVHLNKTIRVSPDVVDPSSCDFCILV
EVCFSYMFSTGERSDRDNVTIHFAIEADVTGTKSRLLFRENGQSVYSGFLSMPNKRCDTR
RVTLLSPIRDKVRPLVFSLNVSLYQRFPKKKKNTVQDLKLLPVLSESPQTIRTQIHIQKS
CGSDNRCNSNLQMTAQFTDQNQNPFPVQKGHQLLNYNDGLDRLHLEVNVTNKASLGREAE
DAHNAALNVSIPSSLIYSGVRTKGDLQAVMECSVEDSVLLCELGNPFKSNQQVQVLIIFQ
ASGITLDTRRIESLLQLSTFSEQMDLSPVFLSMLVEYSLQTSLTLINPPGPASFRGHVTG
ESAMEETQDVGSLLLFTFLVHLSGKPLGRLGNLEVEFDWPTEVTNGKWLLYLTEIKVNDS
LESRCTPPGNIINPLNLLLPKEERKMRSSEDQVDKNKEQRGRILPLFHHMKISYILDCFH
GAKCVTFVCPLTNMKNTATVTLKARLWNSTMVEDYSDAHSVLVRGRATLKLQTSKPTINM
KPQSTEIEVHIYPDWGQQSVSRTPMWILVASVLVGVLLLSLICLLLWKCGFFVRQSAWRT
SALHQGRIMGKHERQLRDTEDFLIQDQVSSSRMSTKHWVTSWTETN
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtcaacatggcgacaggtgtggtggctttgctcagcgcgtgggttggtgtgtgc
gcagcgtttaacctcgacacagcgttctcactgctgaagacgggcggagacgggagtctg
tttggactttcggtcgctctgcaccaagacctgaagaagggcagttacctgctattggtg
ggcgcgcccagggagaaggccgagactaatgttccagccaatcgaacaggaggagtgtat
agctgcccgatcagtgctgaccaatcagagtgcagcaggctgaagctcatagacccaaac
gtgaatctgtctgaagacctgatcgaagacatgtggttgggcgtctcagtagccagccag
ggcagacctggggggcgggtcctggcatgcggtcatcgattcgttaagctctatggagca
ttaaagctcaggcacatgattggacgctgttatctccgtggaaacgacctccagtacgac
gtcacagacatccactggcaaaacccagaccagccctgcagtcacttgggtgatgtcagc
agtgaggtcatgtgtaacgtcggaatctccgcctccatcacacagactgaggtcatagtc
ggctcacctggaagctacgaatggcaaggtaacgtccacatatcctggatgaatcctcat
gttgtcttcgacacccaaagaacttttttcccaaacctgcagcacagaaacatttataca
ggatattccgttactcaggctcatcgtcttctctctcagcatgatgaaaccatagtaaca
ggagctcctaaagacagtaaagacgatgctcgtggctcagtgctgctcgctgtgaagcag
tctgacaaactgaaaacccagcagactctacgtggtgaacagacgggctcgtacttcggt
aatgccgtggctaccaccgacctcaacaatgacgggtggaacgatctgcttgtgggcgct
cccttttacttccatcgtcagcaggaggcaggtggggcagtgtatatttacatgaacagg
cagggtaggtttgattctctgcccagcgtggtgctgagaggaccaagtggatctgcgttc
ggtatggctgttgctgctgctggagacctgaaccaagatggcttccaggactttgcaatt
ggagctcctttctacgaaacaggaagtgttatgatctggttgggtagccacgttggagcc
tctacacagcccagccaggtgatccttggcagcaaggtctctcctctgttcaggacattt
gggtactctttgtctggaggtctggatgttgacgggaacaaatatccagacctgctggtt
ggctccctggacgacactgtcgctctgctcagaactcgtccagtcgttcatctcaataaa
accatcagagtttctccagatgtcgttgatccaagttcttgtgacttttgtatcctggtg
gaggtgtgtttctcctacatgtttagcactggagagcggagtgacagagacaacgtcacc
atccactttgccatcgaagctgacgtcaccggcacaaagtcccgcctccttttccgtgaa
aacgggcagagtgtgtactccggtttcctgtcgatgccgaataaacgatgtgacactcgg
agagtcacactactgagtccaatccgggacaaagtgagaccgctggtcttctccttgaac
gtctctctttaccaaaggtttccaaagaagaagaagaacaccgtacaggacctgaaactc
ctccctgtactaagcgagtcgccccaaaccatcagaacccagattcacatacagaagtcc
tgtggttctgataaccgttgcaatagcaatcttcagatgacagcccagttcacagatcag
aaccagaaccccttcccagtacaaaagggccatcagctattgaactacaacgatggcctt
gacagactgcatctggaagtcaatgtcactaacaaagcgtctctgggtcgcgaggcagag
gacgctcacaatgccgctctaaacgtcagcatcccttcatcgctcatctattctggggtc
cgaacaaagggtgacctccaggcggtgatggagtgttctgttgaggattctgttcttctg
tgtgagctggggaacccgttcaaaagcaaccagcaggttcaggtgttgatcatatttcag
gcatctggaatcactttagacaccagaaggattgagtctctgctgcagctatccacgttc
agtgagcagatggatctgtctcctgtctttctctccatgctggtggagtattctctgcaa
acatctctcactctaatcaaccctccaggtcctgcctcctttaggggtcatgtgaccggt
gagtctgccatggaggagacgcaggatgtcggcagtttgctgctcttcacctttctggtg
cacctgagtgggaagccgctgggtcgcctaggcaacctggaggtagagtttgattggcca
accgaggtgaccaatgggaagtggctgctgtatctcacagagatcaaagtgaacgactca
ttagagagtcgctgtacgccacctggcaacatcatcaatcccctcaacctactgctgcca
aaggaggagaggaaaatgaggagttcagaggatcaggtggacaaaaacaaggagcagaga
ggaagaattcttcctctcttccaccacatgaagatttcttacattctggactgttttcac
ggggcaaaatgtgtgaccttcgtttgtcctctgaccaacatgaagaacacagctactgtg
accctcaaagctcgactgtggaactccaccatggtggaggactacagcgacgcgcacagt
gtattggttcgaggcagagcaactctaaagctgcagacgagcaaacccaccatcaatatg
aagcctcaaagcacagagattgaggtccatatctatccagactggggacagcagtcggtc
tccagaacccccatgtggatcctggtagcctcggtcctggtgggggtcttactgctgtct
ttgatctgcctgctgctctggaagtgtggtttctttgtgcgtcagagtgcctggcggacc
tcggcgctccaccagggacggattatgggtaaacatgagcggcagcttcgggacactgaa
gacttcctgattcaagaccaggtctcctcatccaggatgtcaaccaaacactgggtgacc
tcctggactgagacgaactga
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