Pungitius pungitius (ninespine stickleback): 119220221
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Entry
119220221 CDS
T07626
Name
(RefSeq) transportin-2-like isoform X3
KO
K18727
transportin-2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119220221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119220221
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119220221
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
Cnd1
PDS5
TPR_IPO5
Arm
Adaptin_N
MMS19_C
Ltn1_1st
Dopey_N
INTS7_N
TPR_TTI1_C
PIK3R4-like_middle
TPR_IPO11
RTP1_C1
CandA_N
DUF3689
UNC45-central
DUF2573
Motif
Other DBs
NCBI-GeneID:
119220221
NCBI-ProteinID:
XP_037331929
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All DBs
Position
12:10266835..10276891
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AA seq
751 aa
AA seq
DB search
MSVSQGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQFFKHCSPKIRSHAIACVNQF
IIGRAQALMDNIDTFIESLFALAADEDSEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYM
LQRTQDPDENVALEACEFWLTLAEQPVCKEMLSGHLVQLTPILVNGMKYSEIDIILLKGD
VEEDEAVPDSDQDIKPRFHKSRTVTLQHEGGGEDEEGEDNDDDDDDDDDTLSDWNLRKCS
AAALDVLANVFRDDLLPHLLPLLKGLLFHPDWVIKESGILVLGAIAEGCMQGMVPYLPEL
IPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPLMTELLKRILDGNKRVQEA
ACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQP
EYIQKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKT
LAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGLGAHVEQLVARSNIMTLLFQCMQDT
MPEVRQSSFALLGDLTKACFLHVKPCTAEFMPILGLNLNPEFISVCNNATWAIGEISMQM
GAEMQPYVGMVLPHLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPQLQQFIRPWCT
SLRNIRDNEEKDSAFRGICVMIGVNPAGVVQDFIFFCDAVASWVSPKDDLRDMFYKILHG
FKDQVGDENWQQFSEQFPPLLKERLSACYGV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtctcagggctcatttggagcactgcagaagatctgtgaggattcgtcggag
cttctggacagcgatgctcttaacagacccctcaacattatgattcctaaattcctccag
ttcttcaagcactgcagccccaagattaggtcccacgccatcgcctgtgtgaaccagttc
atcattggcagagcccaggccctaatggacaacattgacaccttcatagagagcttgttt
gcgctagcagcagatgaggactctgaggttcgaaagaacgtgtgccgagccctggtcatg
ttactggaggtccgcatagaccgccttatcccccacatgcacagcatcatccagtacatg
ctgcagaggacccaggaccctgatgagaacgtggcactggaggcgtgtgagttttggctg
actttagcagagcaacccgtctgtaaggagatgctgtctggacacctggtgcaactaacg
cctatattggtaaatggaatgaagtattcggaaatagacatcatactattgaagggggat
gtagaggaagacgaggccgtaccagatagcgatcaggacatcaagccccgcttccacaag
tcccgcacagtcaccctgcagcacgaaggagggggggaggatgaggaaggcgaggacaat
gatgacgatgatgacgacgacgacgatacactgtcggactggaacctgcgaaagtgttcg
gccgcagctctggacgttctcgccaacgtgttccgcgacgacctgctgccccacctcctg
ccgctcttgaaaggcctgctcttccaccccgactgggtcataaaggagtctggcatcctg
gtcctgggggccatagcagagggctgcatgcagggcatggtgccctacctgcccgagctc
attccccacctcatccagtgtctctgcgacaaaaaggccctggtgcgctcaatcgcctgc
tggaccctgagtcgctacgcacattgggtggtgtctcagccccccgactcctacctcaaa
ccccttatgacggagcttctcaaacgcatcctggatggcaacaagagggtacaagaggcc
gcgtgcagtgcgtttgccaccctggaggaggaggcgtgcacggagctggtgccctacctg
agcttcatcctggacacattggtgtttgccttcgggaagtaccagcacaagaatctcctc
atcctctacgatgccataggaactctggcagactcagtgggccaccacctcaatcagcct
gagtacattcagaagttgatgcccccccttattgccaagtggaatgagctaaaagacgaa
gacaaagatctcttcccactgctagagtgtctgtcgtctgtagcaaccgccctgcagagt
ggctttctgccttactgtgagccagtctatcagcgctgtgtcacactcgtccagaagaca
ctagctcaggctatgatgtacaaccagcatccagaccagtatgaggcccctgacaaggat
ttcatgattgtggccctggacctgctgagcggcctggctgagggtttgggggctcatgtg
gaacagctagtggctcgctcgaacatcatgaccctgcttttccaatgcatgcaggataca
atgccggaggttcgacaaagctcctttgcactgctgggcgatctgaccaaggcgtgcttc
ctccatgtgaaaccatgcactgctgagttcatgcccatcctcgggcttaacctgaatccg
gagtttatctcggtgtgcaacaacgccacctgggccattggcgagatctccatgcaaatg
ggtgcggagatgcagccgtacgtgggcatggttctgccacacctggtagagatcatcaat
cgaccaaacacacccaagacgctgctggagaacacagccatcactattggcagactggga
tatgtctgcccacaagaagtagccccccagctgcagcaattcattagaccatggtgcaca
tctctaaggaatatccgtgataacgaggagaaggactctgccttcaggggaatctgcgtg
atgatcggcgtgaaccctgcaggagtggtgcaggacttcatcttcttctgtgacgctgtt
gcctcttgggtcagccccaaggacgacctgagagacatgttttacaagatcttgcatggc
ttcaaggaccaggttggagatgagaactggcaacagttctctgagcagttcccccctctg
ctaaaggagcgcctgtcggcctgctacggcgtctaa
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