Pungitius pungitius (ninespine stickleback): 119220329
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Entry
119220329 CDS
T07626
Symbol
srsf2b
Name
(RefSeq) serine/arginine-rich splicing factor 2b
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119220329 (srsf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119220329 (srsf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119220329 (srsf2b)
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
SR proteins
119220329 (srsf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
Nup35_RRM_2
RRM_occluded
RRM_8
Motif
Other DBs
NCBI-GeneID:
119220329
NCBI-ProteinID:
XP_037332142
LinkDB
All DBs
Position
12:640501..643859
Genome browser
AA seq
271 aa
AA seq
DB search
MSYGRPPPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGGSGGGGGGGGGGGGGGGGG
GGRGDRRGGPTKRYGGHGRRSRSSSPSPRHRRRSRSRSRSRSRSRSRSRYSRSRSRSYSR
SKSHSPRNKKVKAKSPSRSKSKSKSKSKSKSKSRSRSRSRSRSRSKSKSKSKSKSKSKSR
SRSHTPASKRESRSRSKSPPKSAAENGGESP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtaggcctccgccagacgtcgacggtatgacttccctcaaagtcgacaac
ctgacgtaccggacgtcgcccgagaccctgagacgcgtgttcgagaagtacggccgcgtg
ggggacgtctacatcccccgggaccgctacaccaaagagagccgcgggttcgccttcgtg
cgcttccacgacaaacgcgacgccgaggacgcgatggacgccatggacggcgcgcttctg
gacggacgcgagctgcgtgttcagatggcccgatacggcagaccccctgattcccactac
gggggcagcggcggcggcggtggaggtggtggcggcggcggtggaggaggcggcggaggc
ggcggaagaggagaccgacgaggagggcctaccaagagatacggcggccatgggcgccga
agcagaagctcctcccccagcccgaggcaccggagacgcagccggtcccgcagcaggagc
cgctctcgttcccggagccggtcccgttacagcagatcccggtccaggtcctactcccgc
tccaagtcccactcccccaggaacaagaaggtcaaggcgaagtccccatcccgttcaaag
tcaaagtcaaagtcaaagtcaaagtccaagtccaaatccaggtccaggtcccgatcccga
tcccgatcccgatccaagtctaagtctaagtccaaatcaaagtccaagtccaagagtcgc
tccagaagccacaccccggcctccaaaagagaatccagatcgagatctaaaagcccaccc
aagtctgcagcagagaatggaggtgaatccccgtag
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