Pungitius pungitius (ninespine stickleback): 119220414
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Entry
119220414 CDS
T07626
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-4-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119220414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119220414
Ion channels [BR:
ppug04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119220414
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119220414
NCBI-ProteinID:
XP_062416895
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Position
3:29703524..29707317
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AA seq
492 aa
AA seq
DB search
MELKRHFTTISAFYRCWICINLALAEDWTRVHSEDKLFGVLFGGHSKWSDVVVVKFGLSI
AQLIDVDEKNQMMTTNVWLKQEWTDHKLRWSPSDFHNMTSIRVPSELLWVPDIVLYNNAD
GEFAVTHMTKAHVFHTGRVRWVPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWTYDRAKID
LEPFQSAVDLKDYWESGEWAIVNAVGTYSTKKYDCCHEIYPDVTYHFVIRRLPLFYTVNL
IIPCLLISFLTVLVFYLPADCGEKITLCISVLLSLTVFLLLLTEITPSTSLVIPLIGEXF
ALNVHHRSPETHAMPRWVRGPFLSAVPRWLCMTRPDQGARPARRLHLTDRLLPLRTPGPA
HSPATWVTQESDMDLHGYGYLDPGDEEHCCRLHGNPGRFGPSLAHIFAPLGSDRAPPPAV
ERGALSPAVLSALEGVTYIAERLRAEDADLSVKEDWEHMAVVVDRLFLWVFVIACLLGTA
GLFLPPWLSGMF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagagacatttcacaacgatttcagcgttttaccgctgctggatctgcatc
aacttggcgctggctgaggactggactcgcgtccacagcgaggacaaactcttcggggtc
ttgttcgggggccacagcaagtggagcgacgtggtcgtcgtcaagttcggcctctccatc
gcgcagctgatcgacgtggacgagaagaaccagatgatgacgaccaacgtgtggctgaag
caggaatggactgaccacaagctgcgctggagcccgtccgacttccacaacatgacgtcc
atccgagtcccctcggagctcctctgggtgccggacatcgtgctctacaacaacgcggac
ggagagttcgccgtcacccacatgaccaaggcccacgtcttccacacgggtcgcgtccgc
tgggttcccccggccatctacaagtcctcctgctccatcgacgtcaccttcttccccttc
gaccagcagagctgcaagatgaagttcggctcctggacgtacgaccgcgccaagatcgac
ctggagcccttccagagcgccgtggacctcaaggactactgggagagcggagagtgggcc
atcgtgaacgccgtgggaacctacagcaccaagaagtacgactgctgccacgagatctac
cccgacgtcacctaccacttcgtcatccgccgcctcccgctgttctacaccgtcaacctc
atcatcccctgcctcctcatctccttcctcaccgtgctggtcttctacctgccggcggac
tgcggcgagaagatcacgctgtgcatctccgtgctgctgtcgctcaccgtcttcctgctg
ctcctcaccgagatcaccccgtccacctcgctggtcatcccgctcatcggcgagntgttc
gcgctgaacgtgcaccaccgctcgccagagactcacgccatgccccgatgggtccgcggg
cctttcctgtcggcggtgccccgctggctgtgcatgacgcggccggatcagggcgccagg
ccggcgaggcgacttcacctgactgacaggctcctccccctccggaccccgggccccgcc
cacagcccggccacctgggtcactcaggagtctgacatggatctccatggttacggttac
ttggaccccggggacgaagagcactgctgccgtctccacggtaacccggggaggtttggg
ccgtctctggctcacatcttcgccccgctcggctcggaccgggcccccccccctgcggtg
gaacgtggcgccctgtcccccgcggtgctgtcggccctggagggcgtgacctacatcgcg
gagcggctgcgggccgaggacgccgacctctcggtgaaggaggactgggagcacatggcc
gtggtggtggaccggctcttcctgtgggtgtttgtgatcgcgtgtctgctggggaccgcc
ggactcttcctgcctccgtggctctccgggatgttttag
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