Pungitius pungitius (ninespine stickleback): 119220433
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Entry
119220433 CDS
T07626
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X2
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119220433 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119220433 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ppug04031
]
119220433 (rhot1a)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
119220433 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
119220433 (rhot1a)
GTP-binding proteins [BR:
ppug04031
]
Small (monomeric) G-proteins
Rho Family
Miro
119220433 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
EF-hand_1
RsgA_GTPase
MMR_HSR1
AAA_22
EF-hand_8
AAA
DUF5096
Pox_A32
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
119220433
NCBI-ProteinID:
XP_037332355
LinkDB
All DBs
Position
12:complement(10205358..10218285)
Genome browser
AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRRNMADG
VQDNGLSLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPMIKMPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDEVKDLFKVFPYMPWGPDVNHTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIIYEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGGRGSGKSAFLQAFLGKNLQGQRRIREDHKSFYAISTTYVYGQEKYLLLHEVMPDF
DFLSEADLACDVVCLVYDINNPGSFEYCAKVYKQHFIDSKTPCVVIAAKSDLHEVRQHHS
LSPHEFCRKHKLHPPQPFTCSTAEAPNKDIYTRLTTMAMYPHVRLRCMCASNRCTYCLCQ
NLLKLELLRSIKAQLRRVLFNRHMAQADLKNSTFWLRASVGATVFAVLGFAMYRALLKQR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatactactcgtaggggaacccaaagtggggaagacgtcgctg
ataatgtccctggtcagcgaggagtttcctgatgaggttcctcttcgcgctgaggagatc
accatcccagccgatgtgaccccagagagggttcccacacacattgtggactactcggag
gcagaacagtcggacgagcagctgtaccaagaaatatcaaaggccaatgttatctgcata
gtttactccgtcaacaacaagaagtccattgaaaaggtgaccagccactggattccactc
atcaatgacagaacggacaaggacagcagagtcccattgatcctggtggggaacaagtcg
gacctggtggaacacagcagtatggagaccatcctgccaatcatgaatcaataccaggac
atcgagacctgtgtagagtgctccgccaaaaacctcaagaacatctccgagctgttctac
tacgcccagaaggctgttctccacccgacgggacccctgtactgcccggaggagaaggag
ttgaagccgtcctgcattaagtctttgactagaatcttcaaagtgtctgacctggacaac
gacggcatccttaacgacaacgagctcaacttcttccagaggacctgcttcaatacgccg
ctagcgcctcaggccttggaggacgtaaagaacgtggtcaggaggaacatggcggacgga
gtccaggacaacgggctttcgcttaaaggcttcctgttcctgcacactctgttcatccag
cggggccgacacgagaccacctggaccgtgctgcggaggttcggctacgacgacgacctg
gagctcacacaggagtacctcttccccatgatcaagatgcctccggactgcaccaccgag
ctgaaccacaacgcttacctcttcctccagagcgtctttgacaaacacgacaaggaccga
gattgtgcgctgtcgccagacgaggtgaaggacttgttcaaagtgtttccctacatgccc
tggggtccggacgtcaaccacacggtttgcaccaacgaacagggatggatcacataccag
ggatacctctcccagtggacgctaacaacatatttagatgtacagcgtagcttggagtac
ttgggttatctcggctactccatcatctacgaacaggagtcccaagctgctgccatcaca
gtgacgcgcaacaagcgcatcgacctgcagaagaagcagacccagcgcagcgtcttccgc
tgcaacgtcctggggggccgaggcagcgggaagagcgccttcctccaagctttcctcggc
aagaacctgcagggacagcggcggattagagaagaccacaagtccttctacgccatcagc
acgacctatgtttatggtcaggagaagtacctgctgctccatgaggtgatgccagatttc
gacttcctgtcggaggcggacctagcgtgcgatgtggtgtgcctggtgtatgacatcaac
aaccccggctcctttgaatactgcgccaaagtctacaagcaacacttcatcgacagcaag
acgccgtgcgtggtgattgccgccaagtcggacctgcacgaagtgcggcagcaccacagc
ctctcgccgcacgagttctgccgcaagcacaagctccacccaccacagccgttcacctgc
agcacggccgaggcgcccaacaaagacatctacaccagactcaccaccatggccatgtac
ccccacgtccgcctccgatgcatgtgcgcctccaacaggtgcacatattgcctgtgtcag
aacctcctcaagttggagctgctgcgcagcattaaggcccaactgcgcagggtcttgttc
aacaggcacatggctcaggccgacctgaagaactccaccttctggctgagggcgagcgtt
ggtgccacggtgttcgccgtgctgggcttcgccatgtacagagcgctgctcaaacagcgg
tga
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