Pungitius pungitius (ninespine stickleback): 119220501
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Entry
119220501 CDS
T07626
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119220501 (ubtf)
03021 Transcription machinery [BR:
ppug03021
]
119220501 (ubtf)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
119220501 (ubtf)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
119220501 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
bHLH_PER
DUF4872
Motif
Other DBs
NCBI-GeneID:
119220501
NCBI-ProteinID:
XP_062422036
LinkDB
All DBs
Position
12:complement(5379447..5388506)
Genome browser
AA seq
740 aa
AA seq
DB search
MNGAMEAIPQDKDWAQEDLLKLLEAMKMALPPKDKSKYKTSESHLDWEKVAFNSFTADMC
KQKWQEVSKEIRKFRTLTELIFDAQDYIKHPYKGKKLNTHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVEDFLRDKETFVHSMTKFRELHPDLVE
SMANKGSNIPEKPKTPQQLWLNHEKKAVLKTRPDATSKDIKEILGKQWTQLSDKKRLKWI
AKSLEQQKLYQGTMREYIQQHPELNMTQDVFVKSTLTKAERHLKDKSDGRPDKPPPNGYS
MFCAELMSSMKDVPSTQRMVMCSQRWKLLKQCEKDAYQKRCEQRKKNFEIEMNAFLSSLT
EEEQNRVLSEDKLGFKRAGANGPAAKKKATKAVANPEKPKRPISAMFIFSEERRPKLQQE
RPDLSDSELTRLLARMWNELPDKKKEKFKRMEAILKAETEKREDRSRLPDPPKTAQDIWQ
QSVIGDYLARFKNDRQKAQKSMETTWSTMEKKEKIMWIKKAAEDQKRYERDLCEMRSPAI
VFPTGKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHHPMKARMTEIGSRWQRLPLKEKD
RYKKIAEEKQRQYKGQLEQWLASLTSQERNAYKEYNSQKRRTTAKPGGPAAKAKKSDTEE
EEEEEDEEEEEREKASSDADSSSDDDDDDDDDGDKDDDDDDDDDDDDDDDDDDEAEDKEN
KSEDSSSDSNSQGSSDSDSD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcaatggaggcgatcccgcaagacaaagattgggcacaggaggacctcttg
aagctgctcgaggccatgaagatggccctccctccgaaagacaagagtaaatacaaaaca
tcagagtcccacctcgactgggagaaggtggccttcaattccttcacagcagacatgtgt
aagcagaagtggcaggaggtgtctaaagagattcgtaaattccggactctgactgaactg
atatttgatgcccaagactacatcaagcacccttacaagggcaaaaagttaaatacacac
ccagatttccccaagaagcccttgactccgtacttcagattcttcatggaaaagagggca
aaatacgcaaagttgcacccagagatgagcaacctagacttaactaaaatcctctccaag
aagtacagggagctgcccgacaaaaagaagaaaaagtatgttgaagacttcttacgagac
aaagaaacatttgtgcacagcatgacgaagttcagagaactgcaccctgacctggtggag
agcatggccaacaaaggttcaaacataccagagaaaccgaaaacaccccaacagctgtgg
ttaaaccatgaaaagaaggctgtcctcaagacgcgcccggatgcgacctccaaagacatt
aaggaaattcttggcaaacagtggacgcagctgtctgacaagaagagactcaaatggatc
gccaagtctctggagcagcagaaactctaccagggcacaatgcgggagtacatccagcag
cacccggagttaaacatgacccaagatgtcttcgtcaagtccaccctgacaaaggcggag
cggcacctaaaggacaaatcggacggccgacccgacaagccgcctccaaatggctactcg
atgttctgtgcggagttgatgtcgagcatgaaggacgtgcccagcacgcagcgcatggtg
atgtgcagccagcggtggaagctgctgaaacagtgtgagaaggacgcttaccagaaacgc
tgtgaacagaggaagaagaattttgaaattgaaatgaacgcattcctcagtagtttaaca
gaggaggagcaaaaccgggttttgtccgaggacaaattgggttttaagcgggccggagcc
aacggcccagccgccaaaaagaaggccactaaagcggtggccaatccagagaaacctaaa
aggccaatttcagccatgttcatcttctctgaggaaaggcgcccaaagctgcagcaggag
cgaccggacctttccgacagcgagctcacgcgcctcctcgcgcgcatgtggaatgagctg
ccggacaagaagaaggagaagttcaaacgcatggaggccatcctgaaggctgagacggag
aagagggaggatcgcagtcgtctgccggacccccccaagaccgcgcaggacatctggcag
cagagtgtcatcggagactacttggccagatttaagaatgaccgacaaaaggcgcaaaaa
tccatggaaacaacctggagtaccatggagaaaaaagagaaaatcatgtggatcaaaaag
gcagcagaggaccagaagagatacgagagagacctgtgtgagatgcgctcgcccgcaata
gtcttccccactgggaagaagatgaagtttgagggagaacccaagaaaccgccctcaaat
ggataccagaagttttcccaggagatgctgtccaacggggagctgaaccaccacccaatg
aaagcgcgcatgaccgagatcggcagccgctggcagaggctgccgctaaaggagaaggac
cgctacaagaagatcgccgaggagaagcagaggcagtacaaaggccaacttgagcagtgg
ctcgctagtttgacttcgcaagagagaaacgcatacaaagaatacaattcacagaaacgg
aggactacagcgaaacccggaggccctgcggcaaaggccaagaaatctgacaccgaggaa
gaggaggaggaagaggacgaggaggaggaggagcgtgagaaggcttcctctgatgccgac
tcctccagcgacgatgacgacgacgatgacgatgacggcgacaaggatgacgacgacgat
gacgacgacgacgacgatgatgatgacgatgacgacgacgaagcagaggacaaggagaac
aagtctgaggacagcagcagcgactcgaactcccaggggtcatcggactccgactcggac
tga
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