Pungitius pungitius (ninespine stickleback): 119220511
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Entry
119220511 CDS
T07626
Symbol
42sp43
Name
(RefSeq) P43 5S RNA-binding protein-like
KO
K09191
general transcription factor IIIA
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119220511 (42sp43)
03021 Transcription machinery [BR:
ppug03021
]
119220511 (42sp43)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119220511 (42sp43)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
119220511 (42sp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
TFIIIA_zf-C2H2
zf-C2H2_8
zf-C2H2_jaz
zf-C2H2_6
Zap1_zf1
C2H2_ASCIZ
zf-met
Motif
Other DBs
NCBI-GeneID:
119220511
NCBI-ProteinID:
XP_037332507
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All DBs
Position
12:4445839..4448647
Genome browser
AA seq
374 aa
AA seq
DB search
MNGVASGEPHCGPSLRLLSCTHAGCGATFVRDWRRKEHETVHTGERPCLCTIAGCGRSFT
RISHLRRHMLKHRGVKHFQCNFLNCTKSFFHAGHLKRHLRYAHGDKNKYFKCDQPDCTLT
FKKRRAFKRHLQEHKVVVKSKCSKEGCVAVFDSHIARKAHEKKHAGYRCPRANCLVLEHT
WGKLKKHMAKHSAEFTCQACKKVFKKAEALRRHKRVHASHKPVLVCPREDCNAYFSTTFN
LQHHIRKVHLELFKYKCSFPDCPRMFAMRESLTRHLLRHDPSATTLTKRKRAKKTWQKRL
DGHHLPRVEEDLRSLFALRMRISRRAKVEINLSGLFNERKIPHYVDPEVNLRNLFGIKQP
RLVEGASVVLSLEG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgtggccagcggagaaccccactgcggtccgtcgctgcgactgctcagctgc
acccacgcgggatgcggcgcgactttcgtcagagactggagacggaaagagcacgagacg
gtgcacactggagagcgcccgtgtctctgcacgattgccggctgcggccgtagtttcacg
cgcatctctcacctgaggcgccacatgctgaagcacagaggggtgaagcacttccagtgc
aactttttgaactgcacgaagagctttttccacgcaggccatctaaaaagacacctgcgc
tacgcccacggagacaaaaataagtatttcaagtgtgaccagccagactgcacgttgacc
ttcaaaaaacgcagagcgtttaaacggcacttgcaggagcacaaagtggttgttaagtca
aagtgttcgaaggaaggctgcgttgccgtgttcgactcccatatcgctcgcaaagcgcac
gagaagaagcatgcaggttaccgctgccctcgcgccaactgcctggtgttggagcacacc
tggggtaaactgaagaaacacatggccaaacattcagccgagttcacgtgccaagcgtgt
aagaaagtgtttaagaaagcggaggctctgaggaggcacaagcgcgtccacgcctcccat
aagcccgtgctggtttgtcccagggaggactgcaatgcctacttctcgacgacctttaac
ctgcagcaccacatccgtaaggtgcacctggagctcttcaaatacaaatgttccttcccg
gactgcccgcgcatgtttgccatgcgggagagtttgaccagacacctgcttcgccatgac
ccaagcgccaccaccttgacgaaacgtaagcgggccaaaaaaacctggcagaagcgtctg
gacggccaccatctgccccgcgtggaggaagacctgcgcagcctctttgctctgcgcatg
cggatctcccgccgggccaaggtggaaataaacctctccggcctcttcaatgaacgcaag
attcctcattacgttgaccctgaggtcaacctgcgcaacctgtttggaatcaaacagccc
cgccttgtggagggggcgtctgtggtcctgtcactagaaggttga
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