Pungitius pungitius (ninespine stickleback): 119220580
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Entry
119220580 CDS
T07626
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119220580 (ush1ga)
Cilium and associated proteins [BR:
ppug03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119220580 (ush1ga)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
SAM_1
RGCC
SR-25
Motif
Other DBs
NCBI-GeneID:
119220580
NCBI-ProteinID:
XP_037332577
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Position
12:7242884..7248805
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AA seq
472 aa
AA seq
DB search
MNDRYHKAARDGHLDLLKEATRKDLNAPDEDGMTPTLWAAFHGNLEALRLIAARGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMNCVRYLDTI
ATKQTGLNTKLVGKMKDRAFRDAERRIKECVKMQKKHHKRMERRFHKETSEASASDVMSF
SSYTSSSISHRLHNFNAATVSVPYSQATLHATNRGKTKIQRKLEKKKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVSPKDRGRRNVREMFTRDNYDAISRAISEPDLHGADV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDMEGRDEDSADRSGNNVRSRGRLQQ
YLSADEDSIGSAHSLQDRNVEELPWEEVELGLDDDDEADTSPLEVFLATQGMTDFFSIFK
REKIDLEALLLCSDHDLKSIHIPLGPRKKILDACKRRMETLEEPDCVEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggacggccacctggacctgctgaaggaggcg
actcggaaggatctcaacgccccggacgaggatggcatgacaccgacgttgtgggcggct
ttccacggcaacctggaggctctgcggctgatcgcggcgaggggaggaaaccctgacaag
tgtgacatatgggggaacacaccactccacctggcagctgccaatggtcacctcaactgc
ctcttctttctggtgtctttcggtgccaacatttggtgcctcgacaacgactaccacacg
ccactggacatggccgccacaaagaatcacatgaattgcgtccgctacctggataccatc
gccaccaagcagacgggcctcaacacgaagctggtcggcaagatgaaggacagggccttt
cgcgatgccgagcggcggatcaaggagtgtgtgaagatgcagaagaaacaccacaaacgc
atggagcggaggtttcataaggagacttctgaggcgtccgcatcagacgtcatgagcttt
tccagttacaccagcagctctatcagccacaggctgcacaactttaatgcagctacagtc
agtgtgccatattctcaggctactctacatgccacaaaccgagggaagacaaagattcag
aggaagctggagaagaagaagcagggagacgggacatttaaaatctacgaggacgggagg
aagagtgtgcgctccctctcaggccttcagctgggcaacgatgtcatgtttgtcaaacag
gggacctacgtcagcccaaaagaccgtggccgccgcaacgtccgggagatgttcaccaga
gataattacgatgccatttcacgtgccattagtgagcccgacctccacggggctgatgtg
gactactctgagatcagcactgactcgggacacgattccctgttcaatagacccggtctg
ggaaccatggtcttcagaaggaactacgtgagcggggggatgtttgacatggagggtcgg
gatgaggacagtgcagaccggtcgggcaacaatgtgcgttcgcgcggccggctgcagcaa
tacctgagtgcagatgaagacagcatcggcagtgcacacagccttcaggacaggaatgtg
gaggagctgccctgggaggaagttgaattaggccttgacgatgatgatgaggctgacacg
agccctctggaggtcttcctcgccacacagggcatgactgacttcttctcaattttcaag
agggaaaagattgacctcgaagcactcttgctgtgttctgatcacgaccttaagagtatt
cacatccctttaggaccaaggaaaaagatcttagatgcctgcaagagacggatggagaca
ctagaggagccagactgcgttgaggacacagaactataa
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