Pungitius pungitius (ninespine stickleback): 119220600
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Entry
119220600 CDS
T07626
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119220600 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119220600 (gspt1l)
03012 Translation factors [BR:
ppug03012
]
119220600 (gspt1l)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119220600 (gspt1l)
Translation factors [BR:
ppug03012
]
Eukaryotic type
Release factors
119220600 (gspt1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119220600
NCBI-ProteinID:
XP_037332604
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All DBs
Position
12:14606364..14621099
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AA seq
580 aa
AA seq
DB search
MDPRDTAPDSWEQEDDVEATIDGQLDPAFMALNVNAKPFVPNVNAAEFVPTFSVKAHSEN
LDSAVAVEKMSTMEVSESVAPVENGDSDMTPEEPWDQKEAEPNEEEPGGGSCGDQGPTVT
ANIEENSPEVVMEEEEETPAPKVPLTQPDAPKKEHINVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLV
NKMDDPTVNWSLERYDECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPTDMCSWY
TGLPFIPHLDSLPLFNRSTDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRH
VVEVLSLLTDDVETDDAEPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccccgattcatgggaacaagaggacgatgtggaggccaca
atcgacggacaactagatcccgcattcatggccttaaatgtgaatgctaaaccatttgtg
cccaacgtgaacgccgccgaatttgttccaacgttttccgtgaaagcacattcagaaaat
ctggattcagcggttgctgtggaaaagatgtccacgatggaggtgtcagaaagtgtcgct
ccagtggaaaatggcgactcagacatgaccccagaggagccgtgggaccagaaagaggct
gagccaaatgaggaggagccgggaggcgggtcctgtggagaccagggtccgacggtgaca
gcaaatattgaggagaactctccggaggtggtgatggaggaggaagaggaaacgccggcg
cccaaggttccacttacacagccagatgctccgaagaaggaacacatcaatgttgtcttc
atcggacacgtagatgcaggcaagtccactattggtggccaaatcatgtatctaaccggg
atggtagacaaaagaaccttggagaagtacgagagagaagccaaggaaaagaaccgggaa
acctggtatttgtcttgggctttagacaccaaccaagaggagagggacaaaggcaagaca
gtcgaggtgggccgagcatactttgagaccgacaaaaagcactttaccatcttagacgct
ccaggccacaaaagctttgtgcccaacatgatcggaggtgcatcgcaggcagacttggct
gttctggtgatctctgcgaggaaaggagagtttgaaaccgggtttgaaaaaggtggacag
acacgagagcacgccatgttggccaaaacggctggcgtgaagcacctgatagttctggtg
aataaaatggacgacccaacagtcaactggagcctggagaggtatgacgagtgtaaggag
aagctagtgccctttttgaaaaaagtggggttcaaccccaaaaaagacatttacttcatg
ccatgctctggactgacaggagccaacctgaaggagcccacagacatgtgctcctggtac
acagggttaccattcattccacacttggacagtttgccacttttcaacagatcaactgat
ggccctgtaagattgcccatcgtagacaaatacaaggatatgggcactgtgattctgggc
aaactggagtcaggctccatcagtaaagcacaacagctggtcatgatgccaaaccggcat
gtggtggaggtgttgagtctcctgacagatgatgtggagacggacgatgctgagccaggc
gaaaacctcaagctgaggctgaagggcatcgaagaggaggagatcttgccgggcttcatc
ctgtgtaatgccgagaacctctgccactcaggtcgcacatttgatgcccagattgtcatc
attgaacacaaatccatcatctgtccaggttacaacgcagttcttcacattcacacctgc
attgaagaagtacaaattacagccttaatctgtctggtagacaagaagaccggagacaag
agtaagacacgaccgcgatttgtcaaacaggaccaggtctgcatcgcccgtcttcgcaca
gcaggaaccatttgcctcgagacctttaaagactttcctcagatgggacggttcacattg
cgggacgaaggtaagaccatcgccattggtaaggtgctgaagctagtagctgagcgggac
tga
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