Pungitius pungitius (ninespine stickleback): 119220650
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Entry
119220650 CDS
T07626
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119220650
03015 mRNA surveillance pathway
119220650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119220650
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119220650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_3
RRM_occluded
RRM_7
RRM_5
RBD_AKAP-17A
RRM_MUD2_C
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119220650
NCBI-ProteinID:
XP_037332692
LinkDB
All DBs
Position
12:complement(7997853..8001333)
Genome browser
AA seq
283 aa
AA seq
DB search
MKINGGRAPSPTKRKEEEKTKDRGKEKTGTREGDKERGREKARKHRSASTGSSSRSSSTS
SSSSGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQK
RGDDKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVDMPMDRIHSHLSRG
YAYVEFETPDEAQKALKHMDGGQIDGQEISASAVLTQRVRPPPRRPSPPRRMPPPPPMWR
RSPPRMRRRSRSPRRRSPPRRRTRSRSPGRRRHRSRSSSNSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaatggcggcagggcaccatcaccgactaagcgaaaggaggaggaaaagacc
aaagaccgaggcaaggaaaaaactggtaccagggaaggagataaggagagaggacgggag
aaagctaggaaacatcgcagtgcctctactggcagcagcagcagatctagctcgacttca
agcagcagctctggctcaagctccggttcctcaagtggatccagctcatctggatccagc
cgctctggttcttcaagctctcgttcctcctcatcttccagctcctcgggctcccccagc
cccagtcgaagacgccatgacaaccgccgccgatcccgctcagcgtccaaaacgcaaaag
aggggagatgacaaggagcgaagaaaaagaagcccaagccctaaaccaaccaaagttcac
ttagggcggctgaccagaaatgtcaccaaggaccacatccaggagatcttttccacttat
ggaaaaatcaaaatggttgacatgccaatggaccgtatccactctcacctttccaggggc
tatgcttatgtggagtttgagactcctgatgaggctcagaaggccctcaaacacatggat
ggaggccagattgatggacaagaaattagtgcatctgcagtgctgactcaacgagttcgt
cccccacctcgcagaccgtctccccctcgcagaatgcctccgccgccacctatgtggcgc
cgcagtcctccacgcatgcggagaaggtctcgctcccctaggaggcggtccccaccacgt
cgccgtactcgctcaagatctcctggtcgtagacgccaccgttctcgctccagctctaac
tcctccagatag
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