Pungitius pungitius (ninespine stickleback): 119220673
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Entry
119220673 CDS
T07626
Symbol
tbc1d17
Name
(RefSeq) TBC1 domain family member 17
KO
K19945
TBC1 domain family member 17
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119220673 (tbc1d17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119220673 (tbc1d17)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119220673 (tbc1d17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
119220673
NCBI-ProteinID:
XP_037332728
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All DBs
Position
12:complement(1573815..1578672)
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AA seq
629 aa
AA seq
DB search
MEQNVEDYKLIFEKEGVYLHTNAKRSNQDTTIPGFIRIVERAGVPALEWSPLEDEGRSAP
AVLYTKKDGEGGVEDTNFDPGYEPDWAVISTVKKDRDPAPVRDSGQWSFSLPLSELYSLR
RARFSLGRNFLVLTSRGGHPLPALHFHRGGTRELFRALQRYIVLDQSPVDGRLFLAYPHD
PGALSQSFEKLQLFDDAGADLVSRFIQDPYATTFGGFSKVTNFFKAALRPPGSPGHFRTA
QDPSLPHQFDEEPDFELINCGVALGPRPDVTRGQPLDKWHQFMDPEGRVTDSEKIKEVIF
KGGVSPALRKEVWKFLLGFYPWNSTFKEREDIVRMKTDEYFRMKVQWKSVSEEQEMRNSL
LRGYRSLIERDVSRTDRHNTFFSGDGNPGLTLLHDVLMTYCMYNFDLGYVQGMSDLLSPL
LFVTQNEVESFWCLTGFMELLHQNFEESQEAMKKQLLQLSILLKALDPELCDFLDSQDSG
SLCFCFRWLLIWFKREFSFEDILTMWEVIWSGLPCDNFHLLIACSILQSQRGELIGSDHD
FNTILKHINELTMRLDLQSVLRGAEAIHLQLTQCKELPQKVQQVLGLCSPSSSEEESPER
QAGETQRLLGEPQAGAAAPSGSARVPTYP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacgttgaggattacaagctgatatttgagaaggagggagtttacctccac
acaaatgccaagaggagtaaccaggacacgaccatcccggggttcatccgcatcgtcgag
cgggccggcgtgccggctttagagtggagcccactggaggacgaagggcgcagcgccccg
gccgtgctctacaccaagaaggacggcgaaggaggcgtcgaggacacgaactttgacccc
gggtacgagccggactgggccgtcatcagcacggtgaagaaggaccgcgatccggctccg
gtcagagactcaggtcagtggtcgttctcgctgcccctctcggagctgtactctctccgg
agggctcggttctctctgggcagaaacttcctggtgctgacgagtcgggggggccacccg
ctgcccgccctgcacttccacagaggaggaaccagggagctgttcagggccctgcagcgt
tacatcgtcctggaccagtcgccggttgacgggcggctcttcctcgcctacccccacgac
cccggcgctctctctcagtccttcgagaagctgcagctgttcgacgacgccggcgccgac
ctcgtttcgaggttcatccaggacccgtacgccaccacgttcggcggattctccaaagtc
accaacttcttcaaggccgcactgcgacccccggggtccccgggccacttccgcaccgcc
caggatcccagtttgccgcaccagttcgacgaagagcccgacttcgagctcatcaactgc
ggcgtggcgctcggtcccagaccagacgtaacccgggggcaaccgctggacaaatggcac
cagttcatggacccagaggggcgagtgacggactctgagaagatcaaggaggtcatattc
aaagggggcgtctcaccggctcttcggaaggaggtgtggaagttcctcctgggcttttat
ccgtggaacagcaccttcaaggaaagagaggacattgtgcggatgaaaacggacgagtac
ttccgaatgaaggtgcagtggaagtcggtcagcgaggagcaggagatgaggaactccctc
ctccggggataccggagcctgatagagagggacgtcagcaggacggaccgacacaacacc
ttcttctccggggacggcaacccggggctgaccctgctgcacgacgtgctgatgacgtac
tgcatgtacaactttgatctgggttacgtccaggggatgagcgacctgctgtctcccctc
ctcttcgtcacccagaacgaggtggagtccttctggtgcctgacgggcttcatggagctg
ctgcaccagaactttgaagagtcccaggaggccatgaagaagcagctgctgcagctcagc
atcctgctgaaggcgctggacccggagctgtgcgacttcctcgactcccaggacagcggc
tccctgtgcttctgcttccgctggctgctcatctggttcaagcgcgagttttccttcgag
gacatcctcaccatgtgggaggtcatctggtccggtctgccgtgcgacaacttccacctg
ctgatcgcctgctccatcctgcagtcccagaggggcgagctgatcggctccgaccacgac
ttcaacaccatcctgaagcacatcaacgagctgaccatgaggttggacctgcagagcgtc
ctgcggggggcggaggccatccacctgcagctgactcagtgcaaggagcttccccagaag
gtgcagcaggtcctggggctctgcagcccgtccagctccgaggaggagagccccgagcgg
caggccggcgagacgcagcgcctcctcggcgagccgcaggccggcgccgctgcccccagc
ggctcggcgcgcgtccccacctatccctaa
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