KEGG   Pungitius pungitius (ninespine stickleback): 119220681
Entry
119220681         CDS       T07626                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119220681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppug03041]
    119220681
Spliceosome [BR:ppug03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119220681
 Complex B
    119220681
SSDB
Motif
Pfam: RRM_1 RRM_occluded Transformer
Other DBs
NCBI-GeneID: 119220681
NCBI-ProteinID: XP_037332742
LinkDB
Position
12:1321193..1328017
AA seq 494 aa
MSDFEEFEKQLSENRQERERERHKKRRRSGSPARGDKHRSWSRSREEKRSREEKRSREEK
RSSSGDHRKHSRSPRRTRKKRTRKYWDVPPPGFEHITPLQYKALQAAGQIPTMALLTASA
STGGAAAAPTQVAVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAPSNP
VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFH
VPGVVSTVVPDSPHKLFIGGLPNYLNDDQLGARKIVKICAHSLFGSTRLLLPVPTCNTRQ
VKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDVGATDQAVAGLNGMQLGDKKLIVQR
ASVGAKSANPTSVVETPVTLQVPGLHRLQSSAVPTEVLCLLNMVVAEELVDDEDYEEILD
DVREECRKYGAVRSVEIPRPVGGLEVPGCGKIFVEYVSAADCQEAMRALTGRKFANRVVV
TKYYDPDMYHRHEF
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcggacttcgaggaattcgagaagcagctgagcgagaatcggcaggagagggagagg
gagcgacacaagaagaggagacgcagcggatctcctgcacgaggcgacaagcaccgcagc
tggagccgcagccgggaggagaagaggagccgggaggagaagaggagccgggaggagaag
aggagctcctccggggaccaccggaagcacagccgctctccgaggcgaacaaggaagaaa
agaacccgcaagtactgggatgttcctccgccgggctttgagcacatcacaccgttgcaa
tataaagctctgcaagcggccgggcagatcccgacgatggccctgctgacggcgtccgcc
tccaccgggggggcggcggcggcgccgacccaggtggccgtggtgggcagtcagatgacc
agacaagcccgacgcctctacgtggggaatattcctttcggagtaaccgaggagtccatg
gccgagttcttcaacgctcagatgaggctcgccggcctttcgcaggcgccgagcaaccct
gtgctcgccgtgcagatcaatcaggataaaaactttgctttcttagagtttcggtccgtt
gacgagacgacgcaggcgatggccttcgacgggatcattttccagggtcagtcgctgaag
atcagacgaccccacgactaccggcctttacccggcatctcggagcagcccgctttccac
gttccaggcgtcgtctccacagtcgtccccgactcgccccacaagctgttcataggaggc
ctgcccaactacctgaacgacgaccagctaggggcccgtaagatcgttaagatctgcgct
catagtttgttcggtagtactcgtctcctgctgcccgtgccaacgtgtaacacaaggcaa
gtcaaggagctcctgacgtcgtttgggcctctcaaagcgttcaacctggtgaaggacagc
gccacgtcgctgtccaaaggttacgccttctgcgagtacgtggacgtcggcgccaccgac
caggcggtggccggactcaacgggatgcagctgggcgacaagaagctcatcgtccagagg
gcgagcgtcggagcgaagagcgccaaccccacctccgtcgtagagactccggtgacgctg
caggtccccgggctccaccggctgcagagctcggccgtgcccacagaggtgctgtgcctc
ctcaacatggtggtggccgaggagctggtggacgacgaggactacgaggagatcctggac
gacgtccgcgaggagtgccgcaagtacggcgccgtgcgctccgtggagatcccgagaccc
gtcggcgggctggaggtccccggctgcgggaagatcttcgtggagtacgtttctgctgcc
gactgtcaggaggccatgcgagctctcactggccgcaagtttgcaaacagagtggtggtc
accaaatactacgatccggacatgtaccacagacacgagttttga

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