Pungitius pungitius (ninespine stickleback): 119220731
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Entry
119220731 CDS
T07626
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a isoform X1
KO
K06493
integrin beta 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03266
Virion - Herpesvirus
ppug04081
Hormone signaling
ppug04145
Phagosome
ppug04148
Efferocytosis
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04517
IgSF CAM signaling
ppug04518
Integrin signaling
ppug04810
Regulation of actin cytoskeleton
ppug04820
Cytoskeleton in muscle cells
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
119220731 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
119220731 (itgb3a)
04512 ECM-receptor interaction
119220731 (itgb3a)
04517 IgSF CAM signaling
119220731 (itgb3a)
04518 Integrin signaling
119220731 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119220731 (itgb3a)
04148 Efferocytosis
119220731 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119220731 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119220731 (itgb3a)
04810 Regulation of actin cytoskeleton
119220731 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119220731 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119220731 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119220731 (itgb3a)
04515 Cell adhesion molecules [BR:
ppug04515
]
119220731 (itgb3a)
04090 CD molecules [BR:
ppug04090
]
119220731 (itgb3a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119220731 (itgb3a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119220731 (itgb3a)
Cell adhesion molecules [BR:
ppug04515
]
Integrins
Integrin beta subunits
119220731 (itgb3a)
CD molecules [BR:
ppug04090
]
Proteins
119220731 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
119220731
NCBI-ProteinID:
XP_037332835
LinkDB
All DBs
Position
12:4584756..4603479
Genome browser
AA seq
787 aa
AA seq
DB search
MGNLSDRLVILFLFFSSASKVFGSNICTSQGVTTCRQCMAVHPRCAWCSKEEYGKGGSGA
SRCDYKENLLKGGCSPAAVEFPSSTLNIYADAPLSGKALGKADDVIQIKPQKLGITLRPG
DSQRFTVSVKQAEDYPVDLYYLMDLSYSMKDDLVRLRTLGNELSATMGQTTSKLRMGFGA
FVDKTTNPYMYTSPAEAVENPCYGIGDKCQAQFGFKHVLSLTEKVARFTEEVEKQQVSRN
RDAPEGGFDAVMQAVVCKDRIGWRPDASHLLVFTTDAKTHTALDGRIAGIVQPNDGKCYL
DNENVYNKSTVLDYPSLALMTEKMSENNINLIFAVTDYVFPLYTNYSQLIPGTTVGTLSD
DSGNVIKLIVDAYAKIRSKVELELLGVPEELHLSFNATCLNQEVIPGLKSCSGLKIGDTV
SFSVEAQLRSCPTEKSHSFTIKPRGFKDSLEVTVDFACGCDCEADAKADSPLCSHGNGTF
ECGVCQCHPGRLGPSCECSVEDYSPSDDANCIPKPGAAICSGRGDCLCGQCSCHKNEFGQ
VWGKYCECDDFNCLRFKGELCSDHGKCSCGLCQCDAGWKGENCNCSTVVDTCMSTIGLLC
SGRGSCQCGACQCTQPGAYGDTCEKCPTCPDACTIKKECVECQHFKRGQYIDDNSCSIIC
KNEINLVEELVFHDASAVNCSYKDENDCVVHFQYYEDGSGKSILDVVKEPECPQGADILV
VLLAVAGAILLLGLIGLLIWKLLVTIHDRREFVKFEEERAKAKWDTANNPLYRGATSTFT
NVAYRGN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacctttcagaccgtctcgtgattttgtttctcttcttctcatcggcatcaaag
gttttcggttccaacatctgtacgtcacaaggagtcaccacctgtcgtcagtgcatggct
gtgcaccctcgatgtgcctggtgctctaaggaggaatacgggaagggggggtcgggtgca
tcccgctgtgactacaaagagaatctgctaaaaggagggtgcagtccggcagctgtggag
ttcccatccagcaccctgaacatttacgcggatgccccactcagcggcaaggccttgggc
aaagctgatgacgttatccagataaagcctcagaagctcggcatcaccctacgaccagga
gattcccagcgcttcaccgtgtcagtgaaacaggcggaggattacccagtggacctctac
tatctgatggatctttcctattcaatgaaggatgacttggttcgccttcgcacattgggc
aatgagctttccgccaccatgggccagaccacaagcaaactgcgcatggggtttggagcc
tttgtggacaagaccaccaacccttacatgtacaccagccccgcggaagcagtagaaaac
ccttgctatggaattggtgataaatgccaggcccagttcgggttcaagcatgtgttgtca
ctgacggagaaggtggctcgcttcactgaggaggtggagaaacagcaggtgtctagaaac
agagacgctccggagggtggttttgatgctgttatgcaggctgtggtgtgcaaggacagg
attgggtggcgtccagatgcctcacaccttttggttttcaccactgatgccaagactcac
accgctctggatggacgtatagctggaatcgtccagcccaatgatggaaaatgttacctt
gataatgagaatgtttacaacaaatctactgtgctggattatccttccctggcgctcatg
accgagaaaatgtctgaaaataacatcaatttaatttttgccgtgacggactatgtgttt
ccactttacacgaattacagtcagctcattccaggcacaactgtgggaacactgtccgat
gactctgggaatgtcatcaagctcatcgtggatgcttacgctaaaatccgctccaaagtg
gagctggagctactgggagtcccagaagagttgcatctctccttcaatgccacttgcctg
aatcaggaagtcattcctggacttaaatcctgctccggcctcaagattggagacacagtg
tcgttcagtgtggaggctcagctgcgtagctgtcccacagagaagagccactcctttacc
atcaagcctcgaggtttcaaggactccttggaggtcaccgtggacttcgcctgtggctgc
gactgcgaggcggacgccaaggccgacagccccctctgcagccacggcaacgggaccttc
gagtgtggggtgtgccagtgtcacccgggtcgcctaggtccgagttgcgagtgttcggtg
gaggactacagtccatccgatgacgcaaactgcatcccgaagccgggggcagcgatctgc
agcgggagaggagactgcttgtgcggacagtgctcctgccataaaaacgagttcggtcag
gtttggggcaaatactgcgaatgcgacgacttcaactgcctgcgcttcaagggggaactg
tgctccgatcatggaaagtgtagctgtggcctctgccagtgcgacgcgggctggaaagga
gagaactgtaactgcagcacagtcgtggacacctgcatgtccaccatcggcctgctgtgc
agcggccgcggcagctgccagtgcggcgcctgtcagtgcacgcagcctggggcctacgga
gatacctgcgagaaatgccccacttgtccggatgcctgcacaatcaaaaaggagtgtgtt
gagtgtcaacacttcaagagaggacagtacatcgacgacaacagctgcagtatcatctgc
aaaaatgaaattaatttagtggaggaactggttttccatgatgcgagcgcagtgaattgc
tcctacaaagatgagaatgactgcgtggtgcacttccagtattacgaagacggaagcgga
aaatccattctggatgtggtcaaggagccagagtgtcctcagggcgcagacattttggtg
gtgctcctggctgtggccggagctattctgctactgggcctcattggactgctcatctgg
aagctgctagtcaccatccacgaccgcagggagtttgtcaagtttgaagaggagagagcc
aaagccaaatgggatacggctaacaatcctttgtacaggggagccacctccaccttcacc
aatgtagcataccgaggcaactaa
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