Pungitius pungitius (ninespine stickleback): 119220751
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Entry
119220751 CDS
T07626
Symbol
ngfra
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ppug04010
MAPK signaling pathway
ppug04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
119220751 (ngfra)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119220751 (ngfra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119220751 (ngfra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ppug04050
]
119220751 (ngfra)
04090 CD molecules [BR:
ppug04090
]
119220751 (ngfra)
Cytokine receptors [BR:
ppug04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119220751 (ngfra)
CD molecules [BR:
ppug04090
]
Proteins
119220751 (ngfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
TPR_21
LpqS
Motif
Other DBs
NCBI-GeneID:
119220751
NCBI-ProteinID:
XP_037332871
LinkDB
All DBs
Position
12:5421576..5443532
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AA seq
351 aa
AA seq
DB search
MTSTWSLVIVCASVVLASASKTERAVQVPCETGLYAADGECCEECPPGEGVVKKCGATQT
VCAQCLDSETFSENYSASEQCRPCTECTGLMRMETPCTDSNDAVCVCDYNFFFDAMSGGC
EPCTVCPLGQGVYAHCEHAHDTVCEECVDDTYSDRESSLDPCLPCTICDEASETEVSACT
PTGDSVCHNPLSPTYFTSTSDMDPSPPSFTNYFPPDGSDSPLPGETTTSSAGSPRFLGHG
LNENLIPIYCSILAAVVVGFVAYIVFKRWNSCKQNKQAANNRAATSNQMVTPEGEKLHSD
SGISVDSQSLQEQHQQAQADVQAQLTHSRTQEQIVVRVDGGSQPDSHPPEV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacttccacctggtcgctggtgatcgtgtgcgcttcggtggtgttggcgtcggcgtct
aagacggagcgggcggtgcaggtgccctgcgagaccggcttgtacgctgccgacggagaa
tgctgcgaggagtgtccgcccggagagggcgtggtgaagaagtgcggcgccacgcagacc
gtctgcgcccagtgtctggacagtgagaccttctcagagaactacagcgcgtccgagcag
tgccggccctgcaccgagtgcacgggcctgatgcggatggagacgccgtgcaccgactcc
aacgacgccgtctgcgtctgcgactacaacttcttcttcgacgccatgtcgggcgggtgc
gagccgtgcacggtgtgcccgctgggccagggcgtgtacgcgcactgcgaacacgcccac
gacacggtgtgcgaggagtgcgtggacgacacctactccgaccgggagagctccctcgac
ccctgtctgccctgcaccatctgcgacgaggccagcgagacggaggtgtcggcgtgcacg
ccaaccggggactccgtctgccacaatcctctctccccaacatatttcacttccacctcc
gacatggacccgtctccaccctccttcaccaattacttccccccggatggctcagacagc
ccgttgccaggagagacgaccacttccagcgctggctccccgcgcttcctcggccacggg
ctcaacgagaacctcatccccatctactgctccatcctggccgccgtggtggtgggcttc
gtggcctacatcgtctttaagaggtggaacagctgcaagcagaacaagcaggcggctaac
aaccgcgcggctacaagcaaccagatggtgacaccggagggagagaagctgcacagcgac
agcggcatctcggtggacagccagagtctgcaggagcagcaccagcaggcccaggccgac
gtccaggctcagctcacacactcacgcacacaggagcagatcgtggtgagagtggatggc
ggctcccagccggactcgcacccccctgaagtctga
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