Pungitius pungitius (ninespine stickleback): 119220755
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Entry
119220755 CDS
T07626
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119220755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119220755
03037 Cilium and associated proteins [BR:
ppug03037
]
119220755
Transporters [BR:
ppug02000
]
Other transporters
Pores ion channels [TC:
1
]
119220755
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Stereociliary proteins
119220755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119220755
NCBI-ProteinID:
XP_037332877
LinkDB
All DBs
Position
12:7496035..7503696
Genome browser
AA seq
788 aa
AA seq
DB search
MAYGGDICQIDSDSDFENMGDSEPGHDSFQLFAEPAAGTQRCPETLQMDVFRDFTGADAE
RQPFSASGPIRGEPFDGGQPRALQRHRWSAATLKVLSAMPSRAAAVSRRHQASPCATSRP
PGTIPSDLEPADVEEITSEGKQKMPQFPENTEKQQLVLHLRGLPPGEAMRRLRAAALSLA
DKKDVRRLAFSDAAPSSRNSRSVSCHCRLRVHMSRTWGHCLSGCLHGLTSLQLWHSPMKR
LSGRFGTGVLSYFLFLRTLLLFNLLLFVILGLFLVLPQAANPPPHVSHRHPFTGLELLTG
MGYFINQSVMFYGYYTNGGLQTCRPGSPGVPGCETDRPQYSIPAAYFFTIVVSFLIICII
LVYSVSKSFGRNFQVLASNGNWTVKVFCSWDFKVSKETPVKLQSEKICTQLKELLSEVIR
GENEKSRTQRLRHLIVHLTTWATCLGSISLGVVVVHHLSETAIKQRSFKEAQLMLLSAAV
SGFNLLLPSFFNLCAWVENHDSPSVRVYVSIFRNLLLKVSIVGVLCFRWLGRIALEPEKY
GLECWETFVGQDLYRLLLMDFFFTLLYSLSGEFLWRLFSTKILKRERMPVFDIARNVLEL
IYGQTLTWLGMLFAPLLPGVQIIKLFLLFCTKKTSLMLNCQVSRKPWRASQMTTVFISLL
CFPSFLGAAVSVGYVIWKIKPSSRCGPFRNLTTMFQSGMMRDQQLENSHPILSWLNWAYN
ALLEKPLFLFLVAGVFLLVIYIRTQVVDGQIRIIRRLEKQIENEGKDKEFLIANLQAIYE
RSGLDSPH
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcatacggaggcgacatttgtcaaattgattctgactctgactttgagaacatgggg
gacagtgaaccaggtcacgactccttccagctctttgcagagccagctgccggcacccag
aggtgccctgaaaccctacagatggatgtttttagggactttaccggcgcagatgcagaa
cgtcagccattttctgccagtggccccatcagaggcgagcccttcgacggcgggcagccc
agggctctgcagaggcatcgctggtcggccgccaccttaaaggtcctctccgcgatgccc
agtcgcgctgctgcagtttcgcggcgacaccaggcctcgccctgtgccacctcgcgcccc
cctggaaccatcccaagtgacctggaaccggcagatgtggaggaaataacttctgagggg
aaacagaaaatgccacagttcccggagaacaccgagaagcagcagctggtcctccacctc
cgaggcctcccgccgggcgaggccatgcgcaggctgcgggccgcggcgctcagcctggcc
gataagaaggacgtcaggcgacttgctttcagcgatgcggccccgagttcccgcaacagc
agaagtgtgtcgtgccactgtcgtctacgtgtgcacatgagcaggacttggggtcattgc
ctctccggctgcctccacggcctcacgtccctccagttgtggcattcgcccatgaagaga
ctgagcgggcgcttcgggaccggggtgctctcctacttcctgtttctacggaccctcctg
ctcttcaacctcctcctctttgtcatcttaggcctgttcctggtcctccctcaagccgcc
aaccctcctcctcacgtttcccaccggcaccctttcacgggcctcgagctcctcacgggg
atgggctatttcatcaaccagagcgtgatgttttacggctactacaccaacggcgggctc
caaacctgccgtcccgggtccccgggtgtcccgggctgtgaaaccgacaggccccagtac
agcatacccgcggcctacttcttcaccatcgtcgtctccttcctcatcatctgcatcatc
ctcgtgtacagcgtgtccaagtcctttgggcgaaattttcaggtcctcgcgtctaacgga
aactggactgtaaaggttttctgctcctgggactttaaagtcagcaaagagacgcccgtc
aagctgcagtctgagaaaatctgcacacagctcaaggagctgctgtcggaggtgatccgt
ggggaaaatgaaaagagccgcacgcagcgactgcgccacctgatcgtgcacctgacgacg
tgggcgacatgtctgggaagcatctctctcggcgtcgtggtagtccaccatctgtcagag
actgccattaagcagcgctctttcaaagaagcccagctgatgctcttgtctgcagcggtg
tccggcttcaaccttttactccccagcttcttcaacctgtgtgcttgggtggagaatcat
gactcgcccagcgtacgcgtctatgtctccatcttcagaaacctcctgttgaaggtcagc
attgttggagtgctgtgttttcgctggcttgggagaattgccttggaaccagaaaagtat
ggtttagagtgttgggagacctttgtggggcaagacctgtatcgcttgctgttgatggac
tttttcttcactctgctctacagtctttcaggagagttcctttggaggcttttttccacg
aaaattctaaagagggaaaggatgccagtgtttgacatcgctcgtaatgtgcttgaactc
atatacggacaaacccttacctggctcgggatgctgtttgccccactgcttccaggggtc
cagatcataaaattgtttttgttattttgcacgaagaagaccagtctgatgctcaactgt
caggtgtccagaaagccctggagggccagtcagatgacaacggtgttcatctcgctgttg
tgcttcccctcgtttctcggagctgctgtgtccgtcggttacgtcatttggaagattaaa
ccctcgtcgaggtgcggccctttcaggaatctgaccacgatgtttcagtcggggatgatg
cgggaccagcagctggagaacagccacccgatcctgtcttggctcaactgggcctacaac
gctctgctggagaagccactgttcttattcctggtcgctggggtctttctattggtgata
tacattcgcactcaagttgttgatggccaaataagaatcatcaggcggttagaaaaacaa
attgaaaatgaaggtaaagacaaagagttcctcatcgccaatttgcaagccatttatgaa
cggagtggcctggattcccctcattga
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