Pungitius pungitius (ninespine stickleback): 119220759
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Entry
119220759 CDS
T07626
Name
(RefSeq) protein Tob2
KO
K14443
protein Tob/BTG
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119220759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119220759
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119220759
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119220759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
119220759
NCBI-ProteinID:
XP_037332885
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All DBs
Position
12:complement(12465066..12471148)
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AA seq
405 aa
AA seq
DB search
MHLEVKVALNFIVSYLYNKLPRRRADLFGEELEKILMSRFQGHWYPEAPLRGSAFRCIHL
GAQRDPVVELAAKRSGLDTEEVRTNVPAELSVWIDPYEVSYQIGEKGAVKVLYLEDPPGL
CCDSETAKGLVRDCKGEAEAEAEEAKSLGFNPEAQVFVPIGSQVSPALMPSLSSSPTPLP
AQPGPGLFAYPGSSTPTDPTAHSSNTSTPSPPTGGLPYLSAQQPAPALPAARPQPITFTT
ASFAATKFGSTKMKKCSGAGSAGGSGAVAPPAQRMLALSPTTISAPELLKHKPLSLSLHS
LGGPIASQLSPNAKEFVYPGSPGHLYFDADTQPLHPLASPFQPPHALNTHLSFDPFASPS
PAQSVGIIGSNGGIPYIEKPPFVEGLGSYNLQYPSQPFQPVVLAN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgaagtgaaggtcgccctcaacttcatcgtgtcctacctgtacaataagctg
ccccggcgtcgagctgacctgtttggcgaggagctagagaagatactgatgtctcgtttc
cagggtcactggtaccctgaagcgcctctcaggggctctgccttccgctgcatccacctg
ggagcccagagggaccctgtggtggagttggccgccaagagaagtggcctggacactgag
gaggtacgcacaaatgttcctgcagagctcagcgtgtggattgacccttacgaggtctcc
taccagatcggggagaagggggccgtgaaggtcctctacctggaggacccaccaggcctc
tgctgtgacagcgagacggccaaggggctggtcagagactgtaaaggggaggcggaggcg
gaggcggaggaggccaagagtctgggcttcaaccctgaagctcaggtgttcgtgccaatt
ggaagccaagtgtctcccgccctcatgccgtcgctctctagctcccccacacctctaccg
gcccagccgggccccgggctcttcgcctaccccggctccagcacgcccaccgaccccact
gcccactcctcaaacacctccaccccgtcccctcccaccggcgggctgccctacctctcg
gctcagcagccggcccccgctctccccgccgcccgacctcagcccatcacgttcaccacc
gctagcttcgccgccaccaagttcggctcgaccaagatgaagaagtgcagcggcgccggg
tcggcggggggctcgggtgccgtcgcgccgccggcccagaggatgctcgccctctctccc
accaccatctctgcaccggagctgctcaagcacaagcccctgtctctctccctgcactcc
ctcgggggtcccatcgccagccagctctcccccaatgccaaagagtttgtctacccaggg
tccccgggccacctttacttcgacgctgacacccagcccttgcacccgcttgctagcccg
ttccaacccccccacgctctcaacacccatctgtccttcgacccattcgccagcccttcc
cctgcccagagtgtgggcatcattggcagcaacggaggaatcccctatatagagaagccg
ccatttgttgagggtttaggaagctacaacctgcaatatccgagccagcccttccagccc
gttgtgctagccaactaa
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