Pungitius pungitius (ninespine stickleback): 119220761
Help
Entry
119220761 CDS
T07626
Symbol
dcaf7
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119220761 (dcaf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119220761 (dcaf7)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119220761 (dcaf7)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119220761 (dcaf7)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
119220761 (dcaf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
MIOS_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
119220761
NCBI-ProteinID:
XP_037332891
LinkDB
All DBs
Position
12:complement(5855023..5858585)
Genome browser
AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYDAPWTVYAMNWSVRPDKRFRLALGSFMEEYNNKVQVVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcacggcaaaagaaaagaaatctacaaatacgacgcaccgtggacggtgtac
gcgatgaactggagcgtccggccggacaaacgctttcggctggcacttggcagcttcatg
gaggaatacaacaacaaggtccaggtggtgggtctggaagaagagagctcagagttcgtc
tgcaggaacacgtttgaccacccgtaccccaccaccaagatcatgtggatcccggacact
aaaggggtgtacccggacctgctagccaccagcggggactacctgcgcatttggagggtc
agcgacacagaaacacgtcttgaatgtttgctcaacaacaacaagaactctgacttctgt
gctcccctcacgtcttttgactggaatgaagttgatccaaatctgcttggtacttcaagc
attgacaccacctgcactatctggggtttggagacgggccaggtgttgggacgagtgaac
ctggtctctgggcatgtgaagacccagctgattgctcatgacaaagaggtgtatgacatc
gcgttcagccgtgcaggaggtggcagagatatgtttgcctccgtgggggccgatggatcc
gtccgcatgtttgacctccggcacctggagcacagtaccattatctatgaagacccccag
caccacccactgcttcgcctttgctggaacaagcaagaccccaactacttagctacaatg
gccatggacggcatggaggttgtcatcctggatgtacgtgtgccttgcactccggtcgct
cggctaaacaaccaccgcgcttgtgtcaacgggatcgcctgggccccccactcgtcatgt
cacatctgcactgcagccgacgaccaccaggctctgatctgggacattcagcagatgccg
cgagccattgaggatcccatcctggcctacactgctgaaggggagatcaacaacgtgcag
tgggcgtccacgcagccggactggatcgccatatgctacaacaactgcttggagatcctg
cgtgtctga
DBGET
integrated database retrieval system
