KEGG   Pungitius pungitius (ninespine stickleback): 119220770
Entry
119220770         CDS       T07626                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137  Mitophagy - animal
ppug04144  Endocytosis
ppug04145  Phagosome
ppug04148  Efferocytosis
ppug05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119220770 (rab5c)
   04145 Phagosome
    119220770 (rab5c)
   04137 Mitophagy - animal
    119220770 (rab5c)
   04148 Efferocytosis
    119220770 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119220770 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppug04131]
    119220770 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119220770 (rab5c)
   04031 GTP-binding proteins [BR:ppug04031]
    119220770 (rab5c)
Membrane trafficking [BR:ppug04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    119220770 (rab5c)
 Endosome - Lysosome transport
    119220770 (rab5c)
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119220770 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   119220770 (rab5c)
  Exosomal proteins of colorectal cancer cells
   119220770 (rab5c)
  Exosomal proteins of bladder cancer cells
   119220770 (rab5c)
GTP-binding proteins [BR:ppug04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    119220770 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 119220770
NCBI-ProteinID: XP_037332903
LinkDB
Position
12:complement(11235007..11243743)
AA seq 220 aa
MAGRGGPARTNVTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITSTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQGYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKSEPQGGAGSGGRSGGGVVLTDGPSQDRGGNCCGRSN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcggggcgaggcggaccggcacgaaccaacgtcacagcggcgagcaacaaaatctgc
cagtttaagctggtgctgttgggggagtcggcggtgggaaagtccagcttggtgctgcgc
tttgtcaaaggacagttccacgagtaccaggagagcaccatcggagcggccttcctcacc
cagacggtatgtttggatgatacaacggtgaagtttgagatctgggacacggcaggacag
gagcggtatcacagcttggcccccatgtactacaggggggcccaggccgccatcgtggtc
tacgatatcaccagcacagatacattcacacgtgcaaagaactgggtgaaggagctgcag
cgacaagccagcccaaatatagtcatcgccctcgcaggaaacaaagccgacctggcaaac
aagagagccatcgacttccaggaagcacagggatatgcggatgacaacagtttgctcttc
atggagacttcagccaagacggcgatgaatgtcaatgagatttttatggctattgccaag
aagctccccaagagcgagcctcagggtggagcgggcagtggtggacgatccggaggcggc
gtggtgctgacggacggaccgtcacaggaccgaggcggcaactgctgtggtcgcagcaac
tag

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