Pungitius pungitius (ninespine stickleback): 119220850
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Entry
119220850 CDS
T07626
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420
Nucleotide excision repair
ppug04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119220850 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
119220850 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ppug03051
]
119220850 (rad23aa)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119220850 (rad23aa)
Proteasome [BR:
ppug03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
119220850 (rad23aa)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119220850 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
119220850
NCBI-ProteinID:
XP_037333020
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Position
12:complement(18136874..18141698)
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AA seq
367 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIETERGKDNFPVSGQKLIYAGKILQDDTPIK
DYNIDEKNFVVVMVSKAKPAAAVAAAAASPPASEAPKPPVQDSGSTSTAVPATTSAPAAT
PAAVPIPPEEAKEEPSAEATEPQPASSSGAGQGLDASSALVTGAEYEAMLTEIMSMGYER
ERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPPSGPAEAPPLVEGENPLAFL
RTQPQFLHMRQAIQQNPTLLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGEAP
EVGELGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLL
NQGLEDD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctcaaaacactgcaacagcagaccattcagatcgagatagaccccgag
caaacggtgaaggccttaaaagagaagatagaaacggaaaggggaaaagacaactttccc
gtatctgggcagaagctgatatatgctggaaaaatcctgcaagatgacacgcccattaaa
gattacaacattgatgagaagaattttgtggtggtgatggtttccaaggctaagccggcc
gccgccgtcgcagctgccgccgcctcgcccccggcctcggaagcccccaaaccccccgtg
caggactctggctccacgtcaacagctgtcccggctacaacctcggccccagccgctacc
ccggcagctgtccccatcccccccgaggaggccaaagaggagccaagcgccgaagccacg
gagccacagccggccagctccagcggagcgggtcagggcttggacgcttcctcggcgctg
gtgaccggagccgagtacgaggccatgctcacagagatcatgtccatgggctacgagagg
gagagagtggtggccgcgctgcgggccagcttcaacaacccccaccgagccgtggagtac
cttctcactggtatccccagcagcccagtgcaggagagtaaccccccagcgcaggccccc
ccatctggacctgctgaagccccgcccctagtcgagggagagaacccacttgcattcctg
cggacccagccacagtttctgcacatgagacaggccatccagcagaaccccaccctgctg
ccagctctgctccagcaactgggccgagagaatcctcagctcctacagcaaatcagccag
caccaggagttgttcatccagatgctgaacgagccagtgggagaggggggggaggcgcca
gaagttggagagttgggggcagcgggggaggagggcgcgcccgtcaactacatccaggtt
actcctcaggagaaggaggccattgagcggttaaaagcgctgggtttccccgaggcgctg
gtgatccaggcctactttgcctgcgagaagaacgagaacctggcagccaactttctcctc
aaccagggcctggaagacgactga
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