Pungitius pungitius (ninespine stickleback): 119220858
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Entry
119220858 CDS
T07626
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119220858 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119220858 (rangap1a)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119220858 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
CDC45
PI3K_1B_p101
SDA1_dom
RPN2_C
Prothymosin
DUF4746
NOA36
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
119220858
NCBI-ProteinID:
XP_037333042
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All DBs
Position
12:complement(12427200..12434923)
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AA seq
578 aa
AA seq
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MAADSVAQLTDSLAKTGVVEVELSYKGQGRKLDDAKSVSDMVKEIQEFDDLQALRLEGNT
VGVEAAKAIAKALETKSMFKRCYWSDMFTGRLRSEIPAALNSLGDAVMLAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACYTLQELRLNNCGMGIGGGKILAASLIQCHKKSSAEGTPL
GLKVFVAGRNRLENDAATALAQAFQLMGSLEEVHMPQNGINHPGVTALAKAMQHNSALRI
LNLNDNTFTEKGAIAMAQALKHLRNIQVINFGDCLVRPAGAIAIAEAVSEGLPILRELNL
SFGEITEDAALAVARAVKGRDKLEKLDLNGNSLGEDGCKTLKDAMEAMKMGQLLGSLSDD
EGEPDDDDDVDDEDDEEEDDDVDEEEIEEEEEEEEEEEEEEESTGIKVSTPSSVSRPPDV
SSFLSFPSPDKLLKLGAKRAMLIEEQVDVSDPTKTAEAFLKIASVYKEENNDVKNAVLDS
IDALLKKAFSTPSFQGYSFVSSLLVLLGLLKSEDKVKPVLVVPGHLNALEHVVRQDYFPK
ENVAVLQAFLSRNNKALDSCGNARNSLQSTLQRVRCEG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacagtgttgcccagttgaccgactctctggctaagacaggagtagtggag
gtagagctgagctacaaaggacagggaagaaagctggatgatgccaagtcagtgtcggac
atggttaaggagatccaggaatttgatgatttacaagccctgaggttggagggaaacacc
gtaggggtggaggcagcaaaggccatcgccaaggccctagagacaaagagcatgttcaag
cgctgttattggagtgacatgtttacagggcgcctgcgctctgagatcccagctgccttg
aattcccttggtgacgctgtgatgctggcaggggcccggctgaccgttttagatctcagt
gacaacgcctttgggcctgatggggtgaagggaatcgagaagttgctcaagagcacggcc
tgctacacgttgcaggagttacgtctcaacaactgtggcatgggcatcggagggggaaag
atcttggctgcttctttgatccagtgccataaaaaatccagtgcagaaggcaccccgctc
ggcctcaaggtgtttgttgcagggaggaaccgcctggagaacgatgcagccactgccctc
gctcaagccttccagttgatgggcagcctggaggaggttcacatgcctcagaatggcatc
aatcaccctggggtgacggctctggccaaagccatgcaacacaactcagccctccgcatc
ctcaacctcaacgacaacaccttcactgagaagggggctatcgccatggctcaggcgctg
aaacacctacgcaacatccaggtgataaactttggagactgtctggtgcggccagcagga
gccatagctattgcagaagctgtttcagagggactaccaatcctccgggaactcaatctg
tcatttggcgagattacggaagatgcagctctggctgtagcacgagcagtgaagggcaga
gacaagctggagaaactggatctaaatggtaacagtctaggagaggacggatgcaaaact
ctgaaagatgccatggaggccatgaagatgggccagcttctaggatcgctcagtgacgac
gagggcgagccagatgatgatgatgacgtggacgatgaggacgatgaggaagaagacgat
gatgtggacgaagaggaaatagaggaggaggaggaagaagaggaggaggaggaggaggaa
gaggaaagcactggcatcaaggtgtccaccccttcatctgtatcccggccgccagacgtc
tcatctttcctcagctttccgtccccagacaaactgctcaaactaggggccaagagagcg
atgctgatcgaggagcaggtggatgtgtcagatcctacaaaaacagcggaagccttcctc
aagattgcatctgtgtacaaggaggagaataatgacgttaagaacgctgtgttggacagc
atcgatgccctcctgaagaaagctttttccactccgtccttccaaggctacagctttgta
tcatctttgttagtgctgcttggacttctcaagagcgaggacaaggtgaagcctgtgctt
gtggtccccggccacctcaacgccttggagcacgttgttagacaggactacttccccaaa
gagaacgtggccgtgctgcaggccttcctgtcccgaaacaacaaagctctggattcatgt
ggcaatgccagaaacagcctccagtccacactgcagagagtcagatgtgagggctga
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