Pungitius pungitius (ninespine stickleback): 119220869
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Entry
119220869 CDS
T07626
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119220869 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119220869 (nhej1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119220869 (nhej1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
119220869
NCBI-ProteinID:
XP_062417564
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All DBs
Position
3:29177904..29189358
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AA seq
317 aa
AA seq
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MEVAGPPAPSDVLLRRPWLPVSIGGCQLLAKSWFGETAAYHVLLTDVSCVWEERMDSSAI
QRRAKELNRRLQATAEAFFSQLCDVVRPCLTGSDGPPDGDAHFSLTRQQDGNICIKLKSK
LAELPFYWEFHCTPAPVPVVCNQLVRPLLAMSHLLQRQVEQLGGLLGRKDAEIQDYRENG
ATLSRERLQTDIFEKETYREEFMSKALPLLPSEQSEALGFNVDLQRLYGAVVARGNARKR
KLSEEQQTAASAPSLGQCSIAGGSVASSEAGESGTEQGAVSKMADRPAVPQSLPVLSNPA
ARPSSKPKKKKAVGLFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgcaggcccccccgccccctccgatgtcctgcttcggcgcccgtggcttccg
gtgagcatcggcgggtgccagctgctcgccaagagctggttcggggagacggcggcgtac
cacgtcctgctgacggacgtgagctgcgtgtgggaggagaggatggactcctcggccatc
cagaggagagcaaaggagctgaacagacgtctgcaggccacggccgaggccttcttctcc
cagctgtgtgacgtggtgcggccgtgcctgacaggaagtgacgggccgcccgacggcgac
gcccacttctcgctgacgcggcagcaggacgggaacatctgcattaagctgaagagcaag
ctggcggagctgcccttctactgggagttccactgcacccccgcccccgtccccgtggtg
tgcaatcagctggtgcgccccctgctggccatgagccacctgctgcagcggcaggtggag
cagctgggaggtctgctgggaaggaaggacgcagagatccaggactacagagagaacgga
gccacactcagcagagagcggctgcagacggacatctttgagaaggaaacttacagagag
gagttcatgtcaaaggctctacctctcctgccctcagagcagtcagaggctctgggtttc
aacgtcgacctccaacgtctgtacggcgcagtggtcgcccgcggcaacgctcggaaacgc
aagctgtccgaggagcagcagaccgccgccagcgccccgtctttgggtcagtgtagcatc
gcaggtggatccgtcgcctccagtgaagcaggcgagagcgggacggagcagggcgccgta
tcgaagatggccgacagacccgctgtgccacagtctctccctgtcctgtccaatccggcg
gcacggccatcctccaaaccaaagaagaagaaagcagtgggcctgttccgctga
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integrated database retrieval system
