Pungitius pungitius (ninespine stickleback): 119220930
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Entry
119220930 CDS
T07626
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
PDZ_6
PDZ
Ank_5
SH3_9
SH3_1
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119220930
NCBI-ProteinID:
XP_062422139
LinkDB
All DBs
Position
12:complement(3774730..3822086)
Genome browser
AA seq
2424 aa
AA seq
DB search
MTMPFSPLSSDEEQLRMLGSRHLYPGAEEEEEEEEEEEEMDEDEGDVDQEEEENGELDGE
EEDEEEEEVVEEVRRGGLSRVGRGEGHRQPGKPAGRPPGDRQIRSGNPGHATNPYSSNPA
PAHQPPANHVQQQPQRRSKERNTGATSSEDAHVAMMVFRIGIPDIKQTKCLRFNPDATVW
KAKQQVLCSLTESLRDVLNYGLFQPATDGHDAMFLEEERLLREYPQSFEKGVPYLEFRYK
TRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFLDKGLDPNYQDADTGETAL
SLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPVHKAVRGHRHTALLVLLSLGASPDYK
DRRGLTPLYHTVLTGGDTSCCETLLYHHAKLGIRDENGWDETHQACQHGNSQHLEHLLFY
GADSSSQNASGNTALHICALYNKESCSRILLYRGANKETKNNNGQTCFQVAVMSGHFELG
EIIKNHRDTDVVPFVESPKFAPQRRESTRTLTIPHPHPFLRANSDSSMNLPDWMAVPNAP
GTNIVSVQGYKHTGALRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQAPAPASAAGQTA
GQRRRLYSALPGRVFVATRSHSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWFP
SDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKSVLLQKKDSEG
FGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKV
GHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLNTPAIALRSKSMTSEL
EEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQG
PKRDRGRSFYGNEPNYADTSGMGMVPSGLGLGYDRGLYNSGHGPKHGMRRQKSIGVPEEE
RQSLHPPAVKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGWRAKPSQQPVSVSQSTS
APAHYQPYSQAAHFAHGGRERSGSSGTGPGGGAVDHGTAYAHATGHTVQSRAASRKVAYS
GEAGGAGAGAGGGAKSAGLRRGYSNAVLPSSVATAMPQQTTQSQPQRADRGAGAAGGGPR
GGARRGKGPLVKQSKVEDLRAGQGTLGGKGPVEKSSIPIPTIIVKAPSTSSSGRSSQGSS
VEADAPASGEADDAKAPYGPPPSAPGPQPPAPPSVPAPPPPYLPSVRASQDNLDFTSQFG
AAIVGAARRDRERLHEARRKSASLFMSAEEDVSVGASDGTTRTQVSQQQQLGAQPEGSST
RLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSMPTDLYTAAGRQPAS
SGTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFSRQMSSAAFPSSTV
NSQPVSSTAQSSSSSYLVTSSSLAATTASVGRPPSPRILRGGGGSVWSEEGGGGDREREG
GGAREGLRVRFSEDKTVHTHHYQSQPYQPTYKERERDRSRERDRSRERDKEREDYMRRAE
QAAADASLPHPPGRPSFLRMENQADAYILSLTPPSPPPNGSQPTANTTGSAGTGLMVLPP
PAPSIDADDEFVYADPLPPPLQFANSFDRGTGGLSGYSPHGMRANSSTSRQQPVPPPPPP
PPPPPAPIKDSFGGGFHAHTPLPSPQAGDSTASSLTSYDSEVANLTQSAASPYQTSPNPL
PPPPHSPSTLQPTSSTGPPPPPSVSPPPPPGSYHRPFSVSHPHHLYNSSHAPGRSSPTPL
PHTVAPPPGYRGTPAPASTAAAATSAAHRGTFSHAVTASCAAATTCTSAQLYQERAHAAH
AASSTATTGSRRSGEHHRPHPAATKGESQETVVDSGIEELDSRSSSDHHLDSILASVRGD
RLDRAERGGRTGGGGTGESQRGGDFLESYMSYLDGQTFEMQNATAAASTYPKANRFREGG
RTSTAPASFHSHRRRDEQDDDEEGVDDSSRDGYTGRDVQNLGRPISPYFDRPRTPETKPH
WGDGQMAADQSAAILEGKKVYPPASSMKPSIINELSSKLQQRTKDGWSSQSPLGRHRYTF
SEDSASALSPPSARSLSPSPISLSQPSLSPSPTPASQYPNWGRSPSPQPPAASQPPRSHS
PISPTSYAPYPTSPKHRPVYRTKALEFQFIPSRESRKAESHMFQRRRAPSPLISPSERPK
LGPPRPSSLPLLPTTPLYSAMYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSGAPPPPNS
ALVVSRSLSPTHFLSGASSPPMHPHPPPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVAD
WLGYLNLGEHRERFLDNEIDGTHLPSLTKDDFLDLGVTRVGHRMNIERALRTVLDRLASS
PFPILVLSPREGPTERRRDDGSRS
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgttcagccccctgtccagcgacgaggagcaactgaggatgctgggaagt
cggcatctctacccaggggcagaggaggaggaggaggaggaagaggaggaggaggaaatg
gacgaagatgagggtgatgttgaccaggaggaggaggagaacggcgagctggacggggaa
gaggaagatgaggaggaggaggaggtggtcgaggaagtcaggcggggcggcctgtcgcgt
gtgggcaggggggagggacacaggcagccaggtaaaccggccggaagaccccccggggac
agacagatccgttccggaaaccccggacacgccaccaacccctactcgtccaatcccgca
cccgcgcaccaaccgccggccaatcacgtacagcagcagccgcagaggaggtcgaaggag
cgcaacaccggcgccacgtcatcagaggacgctcacgtcgccatgatggtgtttcgcatc
ggcatcccggacatcaagcaaacaaaatgtttgcggttcaacccagatgccacggtgtgg
aaggccaagcagcaggtgctctgctccctgaccgaatctctgcgggacgtcctgaactac
ggtctgttccagcccgccacggacggccacgacgccatgttcctggaggaggagaggctg
ctcagggagtacccgcagtcctttgagaaaggcgtgccatatttggagtttcgatacaaa
accagggtgtacaaacagaccaatctggatgagaagcagctggccaaactgcacactaag
gccagcctgaagaaattcatggattatattcaaaccagcgctgtggacaagatggccaag
ttcttagacaagggcctcgatcccaactaccaggatgccgacaccggtgagactgccctg
tccttggcggtgcagtgtgaaccgggcggaggtgaggccatccgggtcctggtggaggga
ggcgctcacattgacttccgcgccaaagacggactcacacctgttcacaaagctgtgcga
ggccaccgccatacagccctcctggtccttttgtccctgggtgcgtctccggactacaag
gaccggcgagggctgacgccgctctaccacactgtgctgacggggggggacacctcctgc
tgcgaaacactgctttaccaccacgccaaactaggcatcagggacgagaacggctgggac
gagacacatcaggcctgtcagcacgggaactcgcagcatctggagcacctcctcttctac
ggggcggattcttcctcccagaacgcctctggaaacactgccttgcacatctgtgctttg
tacaacaaggaaagctgttcacgaattctgctctatcggggagcaaataaagaaacaaag
aacaacaatgggcagacctgctttcaggtggctgttatgtccggccattttgaactggga
gaaattatcaaaaaccaccgggacaccgatgtggttccctttgtggagtctccaaagttt
gccccccagaggcgggagagcacccgcactctgacaataccccaccctcaccctttcctc
cgggccaacagtgacagcagcatgaaccttcccgactggatggcggtgcccaacgcccca
gggaccaacatcgtctccgtgcagggctacaagcacacaggagccctgcggagctccagc
agtcccagaggggcgaggacacgttccccgtcccgggggaggatcggagacaaggaggac
cggagcaggcagagccggagacaagcgccggcccccgccagcgcagccgggcaaaccgcg
ggccagcggaggcgcctctacagcgcgctgccaggacgggtctttgtggccacgcgatcg
cactcggcccagggagagcgggaaatcagcttcagtaagggagaccgggtcaaagtgctg
agtgttggcgagggcgggtactgggagggaacggtcaggggtcgcacgggttggttcccc
tccgactgcgtggaggaagtgatgcttcggagccaagacaaccgatcagagagccgcgga
gaacgagccaaaaggcttttccgccactacaccgtgggatcctacgacagcttcgacgcc
cccagtgactatataatcaaggagaagtcagtgctcctgcagaaaaaagacagcgagggt
ttcggctttgtgttgcgaggtgccaaagctcagactcctattgaggagttcaccccgacc
ccggccttccccgccctgcagtacctggagtcagtggacgagggaggcgtcgcctggagg
gcgggtctcaggatgggggatttcctgatagaggtcaacggacagaatgtggtgaaagtc
ggtcaccgacaagttgtcaacatgatccggcaaggtggcaacagcctcatggtgaaggta
gtcatggtaacccgaaaccctgacatggaggagggttcgaggaagaaaatcccccagcag
agtaagaggctgaacactcccgccatcgccctaagatccaaatccatgacttcagagctg
gaggagatggtggagagagctgctaccccgtggaaaaaaaaatcagaattcgaatcctca
caagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaaatt
cttgcagcagctcagcagacaatcagcaccaatgaggcaccggggacacggggacagggg
ccaaagagagacagaggacggagtttctacggcaatgagccgaactacgccgatacgtcc
gggatggggatggtgccgtcggggctgggcctcggctacgaccgcggcctgtacaactca
ggtcacggcccaaagcacggtatgcggcggcagaaatccatcggcgtgcctgaggaggag
aggcagtcgctgcaccctccggccgtgaagttcgcccgcagtctgtctgtgcccggcccg
gacgacatccctccccctcccaccacggcgccgccagagcctccgttctcctccgctccg
ccgctgggctggagggcaaagccgtcccagcagcccgtctccgtgtcccagtccacctcg
gcgcccgcccactaccagccgtactcccaggcggcgcatttcgcccatggcgggagggaa
aggtcgggcagttccggcacgggccccggtggtggagcggtggaccacggcaccgcttac
gcacacgcgaccggccacactgttcaaagcagggctgcttcgcgaaaagtcgcctactcg
ggggaggccggcggagccggcgcgggggccggcgggggggcaaagagcgcggggctcagg
agaggctacagcaacgccgtcctcccgtccagcgttgccaccgcgatgccccagcagact
acgcagagccaaccccagcgcgccgaccgcggcgctggagcggcaggcggcggtcccagg
ggaggggccaggagaggcaagggaccactggtgaaacagtccaaggtggaggacctgcgc
gcgggccagggcaccctcggggggaaaggcccggtggagaaaagctccatccccatcccc
accattatcgtcaaggcgccctcgaccagcagcagcggacgcagcagccagggcagcagc
gtggaggccgacgctcctgcatcaggagaggcggacgacgccaaagcaccctacggccct
cctccctcggcgcccggtccacagcccccggccccgccctccgtcccggcgccgccgcct
ccctacctgccttctgtgcgagcctcccaggacaacctggacttcacgagccagtttggg
gcggccattgtcggcgccgctcgccgggacagggagcggctgcacgaagctcgccgaaag
agtgcctccttgttcatgtccgccgaggaggacgtgagcgtcggggcgagcgacgggacg
acgaggactcaagtgtcacagcagcagcagctcggcgcgcagcccgagggttcatccacg
cggctccgcccgtccaagtccatcgacgagggcatgttctccggggacactttcatccac
cacacccgcagtatgccccccgccttcggcctccccgagtactcctcgcctgccctggac
tatcaacccaagtcgatgcccaccgacttgtacacggcggcgggcaggcagccggcgtcc
tccggcacgaccaccttcattcacccgctgaccgggaaggccctcgaccccacgtcgccg
ctcggcctcgccctggccgccagggagcgcgccctgcgggacgacagcaggctgaggagg
gggaccgaacaccacttcagccgccagatgtcgagcgccgcgttcccctcgtcgacggtc
aactcccagccggtgtcgtccaccgcccagtcctccagctcctcttacctggtcacctcg
tcctctctggccgccaccacggcctccgtcggtcgcccgccgtcgcccaggatcctcaga
ggaggcggcggcagcgtgtggagtgaggaaggcggcggcggggacagggagcgcgaggga
ggaggggctcgcgaggggctccgagttcgcttctccgaggacaaaacggtccacacgcac
cactaccagtcgcaaccgtaccagccgacgtacaaggagagggagcgggacaggtcgagg
gagcgggacaggtcgagggagcgggacaaagaaagagaggattacatgaggagggcggag
caagctgccgccgacgcgtccctcccccatccgcccgggagaccctcctttctcaggatg
gaaaatcaagcggacgcctacatcctgtccctcacccctccctcgcctccacctaatggt
tctcagccgacagcgaacaccaccgggagcgctgggactgggctgatggtcctccccccc
cccgccccctcgattgacgccgacgacgagttcgtctacgccgaccctctcccgcctccg
ctgcagtttgccaacagcttcgaccggggcacgggggggttgtccgggtactcgccacac
gggatgcgcgcaaacagctcgacgtcccgccagcagccggtccctccgcctcctcctccc
ccaccccctcccccggcccccattaaagactcatttggaggtgggtttcacgctcacacc
cccttgccctcccctcaggcaggagactccaccgcctccagcctcacgtcgtacgacagc
gaggtggcgaacctcacgcaatccgctgcctccccataccaaacgtcgcccaaccccctc
ccgccgccgcctcactcgccctccaccctgcagcccacctcgtcaacgggacctccacct
ccaccgtcggtctccccgccacccccgccggggtcctatcacaggcccttctccgtgtcc
cacccccaccacctttacaacagctcacacgcccctgggcgctcttcgcccacgcctctc
ccgcacaccgtcgcacctcccccgggctaccgcggtaccccggcaccggcctcgaccgcc
gccgccgccacctccgccgcgcaccggggcaccttctcgcacgccgtgaccgctagctgt
gccgctgccacaacgtgcacctccgctcagctctaccaggagcgcgcacacgccgcacac
gccgcatcctccactgccaccacggggagtcgcaggtcaggggagcaccaccgtcctcac
cctgctgccacgaaaggagagtcccaggagacggtggtggactctgggatcgaggagctg
gacagccgcagcagcagcgaccaccacctggacagcatcctggccagtgtccggggagac
aggctggaccgggcggagaggggaggacggacgggaggaggggggacgggggaatcacaa
aggggaggggattttctggagtcttacatgagctacctggacggacaaaccttcgagatg
cagaacgccacggcagcggcgtccacctacccgaaggcgaacaggttcagagagggaggt
cggaccagcaccgcccccgcttccttccactcccacaggcgcagggacgagcaggacgac
gacgaggagggggtggacgacagcagccgcgacgggtacacggggagggacgtgcagaac
ctgggacgtccaatatcgccgtactttgatcgcccccgcaccccggagacgaagccccac
tggggcgacgggcaaatggcggctgaccagtccgcggcgattctagaggggaaaaaggtt
tacccccccgcgtccagtatgaagcccagcatcataaatgagctgagcagcaaactgcag
cagagaaccaaggacggctggagcagccagagccctctgggccgacacaggtacacattc
tcagaagattcggcctcggctttgagtcctccgtcggctcgatccctgtccccgtctccg
atttcgttatcgcagccgtcgctgtccccgtcccccacccccgcctcccagtaccccaac
tggggacgctcgccgtcccctcagcccccagctgcgtctcagcctcctcgttcgcattcc
ccgatttcccccacgtcctacgccccgtatcccacttccccgaaacacaggcccgtctac
cggaccaaagccctggaattccagttcatccccagccgcgagtcccgcaaagcagagtcg
cacatgttccagcgccgcagggcgccgagtcccctcatctccccgtcggagaggcccaag
ctgggtccgccgcggccgtcgtccctcccgctgctgcccaccacacccctctacagcgcc
atgtacgacctgcggggctcgatcacgccgccgtccccggggaacccgctcggggacccg
tacttctcgccctcccctccgctgttcgcgccctcgggcgcgccgcctcctcccaactcg
gccctggtcgtctctcgatccctttctcccactcacttcctgtccggggcctcctctccg
ccgatgcacccccaccctccgcccacatgcctgagttacccccacctgccgccaccttcc
cccacaaagcctttcgcctccaagccgctgccgtactggaccaagtacgacgtcgcagac
tggctggggtacctgaacctgggggagcacagggagcgtttcctggacaacgagattgac
ggcacccacctgccctccctcaccaaggacgactttctggatctgggcgtgactcgcgtt
ggccaccgaatgaacatagagcgggccctcaggaccgtattggacaggctggccagtagc
ccgtttcccattttggttctgtcccctcgggaaggtccgactgagaggaggagggatgac
gggagccgcagctga
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