KEGG   Pungitius pungitius (ninespine stickleback): 119220938
Entry
119220938         CDS       T07626                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppug03019]
    119220938 (atxn2l)
Messenger RNA biogenesis [BR:ppug03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119220938 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 119220938
NCBI-ProteinID: XP_037333190
LinkDB
Position
12:complement(525799..537376)
AA seq 929 aa
MHMTKKTRNTMKPPSQTSPLSSIVFEGVYNNARMLHFLTAVVGSTCDVRVKNGAAYEGIF
KTLSSQCELAVDAVHKQSDGGGGGGEEGGGSSQSSPPKIEDITDTMIFSPTDLVTMTCRD
VDLNFAIKDAFTDTSISSSRVNGDHREKVLQRWDGNGENFELEADTSNGWDANEMFRFNE
EAYGVKSTYDSSLSMYTMPLEKGTSEVFRQREARASRLANEIESSLQYRRRVSLENDEGR
SEEDKYSSVVRGGEDRASPGFASIGSEGKYVPLPQRARETGLSGRTGASGRNAAPPVSSR
HPPAGSSSSDRSSSLSVRTTFSPHQSQGSPPAASSPPCTNSVLPHSLSHPQALADSTRST
VNGVTSRTSPKTQRIQSSRTLRNPNSQSSPAGVSRAPKHDGPPQELPLVSPVFLDSAAAS
VTIATAAKPSGPTPLFPVDVNEILSTAAKERAESLCEGKSCKAPTVQQRNQLEELRKFGK
EFRLQPASSPSASPASTDPPQHSSADSSPAPPKPASSCSAQDPQQGASSGPEGPAPEGQQ
PGTAPGGEDRGERPEAAATAQVKNSTLNPNAKEFLPVKVTPVQKPAPTPTPPRPTPPSPS
LVLAPQGQPGGGAIYGNPPGHYLSYVSPLHIQGHQIQAPQMYQYTMSTVNQGKYPRAKGP
VVGQRPEHHGSQASSMIPAAASAAGPPLVASPYPQSYLQYGQVIQALPPHYHGQPVYSML
QGGARMLTSGGPPQQMGPPGPQYPSQAEGPQGPQQAMYAQSFTHHSGAMHHPQPSSTPTG
NQPPPQHTAPSPGHNQSNQVGPQPQSMFHSGGLQAPAPPNMQPGHSSPQASYAMQGYSLP
GHQPLPHGFPSIGQLTQAHVTGGMSGPHHSAAHGLPPVMLHYVSPQQGGGSNPQHGPQQG
APQHFYISPQALQVQAHHSQQLSFHPSAN
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcacatgactaaaaagaccaggaacacaatgaaaccgccatcgcaaacatccccttta
agcagcatagtgtttgaaggcgtctacaacaacgctcgaatgcttcacttcctcacggcc
gtcgtgggctccacttgcgatgtgagggtgaagaacggagcagcgtacgaaggaatcttc
aagactttaagctctcagtgcgagctggctgtggatgccgtgcacaagcagagcgatgga
ggaggaggaggaggagaggaaggtggaggaagcagccagtcctctccacctaagattgaa
gacataactgacaccatgatcttcagccccaccgacctggtgacgatgacctgccgcgac
gtcgacctcaacttcgccatcaaagacgcgtttaccgacacgtccatcagctcgtcgcgg
gtgaacggggatcaccgggagaaagtcttgcagaggtgggacgggaacggagaaaacttt
gaactggaggcggacacatctaacggttgggatgctaacgagatgttcaggttcaacgag
gaggcgtacggtgtgaagtccacgtatgactcgagcctctccatgtacaccatgcctctg
gagaagggcacctccgaggtctttcggcagcgggaggcgcgagccagccggctggccaat
gagatcgagagcagcctgcagtaccgccggcgggtctccctggagaacgacgagggccgc
agcgaggaggacaagtacagctcggtggtccgggggggggaggaccgggccagccccggg
ttcgcctccatcgggagcgagggtaaatacgtccctctcccgcagcgagccagagagacc
ggcctgtctggcagaaccggtgcgtccggtcggaacgccgcgcccccggtctcgtccagg
cacccgccagcaggctcctcctcctccgaccggagcagctcgctgtccgtcaggaccacc
ttctcccctcaccagtcgcagggcagcccgccggccgccagcagccccccctgcaccaac
agcgtcctgccgcactccctctcccacccacaggccctcgccgactccacgcgctccacc
gtcaacggagtcacatccagaacttcccccaaaacccagagaattcagagcagcagaacc
ctgaggaacccaaactcccagtcctcacctgcaggagtctctcgtgctcctaaacacgac
ggccccccacaggaacttcctctggtcagtcccgttttcctggactctgccgccgcttcc
gtcaccatagcaaccgctgccaaaccttccggccccacccctctattccctgtggatgtg
aacgagatcctcagcaccgccgctaaggagcgagctgagagtctctgtgaaggaaagagc
tgcaaagctccgacggtgcagcagaggaaccagctggaggagctgcgcaagttcggcaaa
gagttccggctgcagcccgcctcctctccgtctgcaagccccgcctccaccgatcctcct
cagcacagctctgccgactcctcccccgcaccgcccaaacccgcctcctcctgctccgcc
caagacccccagcaaggcgcctcctccggccctgagggtccggcgccggaggggcagcag
cccgggacggcccccggcggcgaagaccgaggcgaacgacccgaggccgcggcaacagcc
caagtgaagaactccaccctgaaccccaacgccaaggagttcctccccgtgaaggtgacc
cctgtccagaagcctgcgccgacccccaccccacctcgacccacgccccccagcccctca
ttggtcctggctcctcagggacagccagggggaggagccatctacgggaacccacctgga
cactacctgtcctacgtctcccccctccacatccagggacaccagatccaggctcctcag
atgtatcagtacaccatgtcgactgtcaatcagggcaaataccccagagccaaaggtccg
gtggtgggtcagcgccccgagcaccacggctcccaggcgtcctccatgatcccggccgcg
gcctcggccgccgggccccccctggtggcctcgccgtacccccagtcctacctgcagtac
ggtcaggtgatccaggccctgccccctcactaccatggacagccagtttactcgatgctt
caggggggggcgaggatgctgacgtccgggggccccccccaacagatgggtcctcctggc
ccccagtaccccagccaggctgagggcccccaggggccccagcaggccatgtatgctcag
tcctttactcaccactcgggggccatgcatcatcctcagccctccagcacccccactggg
aaccagccccccccccagcacacggctcccagtccaggacacaaccagtcaaatcaggtt
ggtcctcagcctcagtccatgttccactctggaggtctgcaggccccggccccccccaac
atgcagccgggccacagctccccccaggcctcctacgccatgcagggctacagcctgccg
ggccaccagccgctgccccacggcttcccctccatcggacagctcactcaggctcacgtc
acaggcggcatgtccggcccccaccactcagcagctcacggcctgccccccgtcatgctg
cactacgtctccccccagcagggcgggggctccaacccccaacacggcccccagcagggg
gcgccgcagcacttctacatcagcccacaagcccttcaggtgcaggctcaccacagccag
cagctctccttccacccctcagccaactga

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