Pungitius pungitius (ninespine stickleback): 119220992
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Entry
119220992 CDS
T07626
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119220992
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119220992
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119220992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119220992
NCBI-ProteinID:
XP_037333278
LinkDB
All DBs
Position
12:complement(18471528..18475325)
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKAAVFFGGMAIKKDEDVLKKNCPHIVVGTPGRMLALIR
NKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFKITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgatgttgataacgagctgctcgactatgaagaggatgaggagccccaa
ggagccccagagagtgcagcacccgcaggcaagaaggaggtgaagggctcctacgtctcc
atccacagctctggcttcagagattttctgctcaagccagagctgctccgcgccatcata
gactgtggttttgagcatccatctgaagtccagcacgaatgcatcccacaagctattctg
ggcatggacatcctgtgccaggccaagtctggcatgggcaagacggctgtgtttgtgttg
gcgacactgcagcagattgaacctgtcgatggacaggtgtctgtattagtcatgtgccac
acacgagagctggccttccagatcagcaaggagtacgagcgtttctccaagtacatgtcc
tcggttaaggcggccgtgttctttggcggcatggccatcaagaaggacgaggacgtcttg
aagaagaattgccctcacatcgtggtgggaacgccgggccgcatgctcgctctcattcgc
aacaagaccctgtccctgaagaacgtcaagcactttgtcctggatgagtgtgataaaatg
ttggagcagctagacatgaggcgtgatgtccaggacatctttaagatcacaccccatgag
aagcaggtcatgatgttcagcgccactctgagcaaggagatacgaccagtctgccgcaaa
ttcatgcaggatcccatggaggtatttgtggacgacgagaccaaactgacactccatggc
ctgcagcaatactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgttggagttcaaccaggtggtgatctttgtcaagtcagtccagcgctgcgtt
gctctggcccagcttctggtggaacagaatttccctgctatcgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaatttaaggacttccaaaggcggatcctg
gtggccaccaacctctttggtcgagggatggacatcgagcgggtcaacattgtcttcaac
tacgacatgccggaagattctgacacctatttgcacagggttgcccgtgccggtaggttt
ggcacaaaggggttggctataaccttcgtctcggatgagacagacgccaagactctgaat
gacgtgcaggaccgcttcgaggtcaacgtggccgagctgccggacgagattgacatctcc
tcttacattgagcagtccagatga
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