Pungitius pungitius (ninespine stickleback): 119221022
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Entry
119221022 CDS
T07626
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119221022 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119221022 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119221022 (coro1a)
04147 Exosome [BR:
ppug04147
]
119221022 (coro1a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Phagocytosis
Coronins
119221022 (coro1a)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119221022 (coro1a)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119221022 (coro1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
Beta-prop_THOC3
WD40_4
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Trimer_CC
Beta-prop_WDR75_1st
DSE1_N
WD40_RFWD3
PAC11
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
WDCP
NBCH_WD40
ASA1
TRM82_WD
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_HPS5
UbiJ_C
BLOC1_2
CC4_CEP85
DNAI3_WD
Leu_zip
DUF1664
DUF7310
Motif
Other DBs
NCBI-GeneID:
119221022
NCBI-ProteinID:
XP_037333313
LinkDB
All DBs
Position
12:complement(3854722..3860417)
Genome browser
AA seq
456 aa
AA seq
DB search
MSRKVVRSSKFRHVFGQALKTDQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFM
VLPMSKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGLTSSL
TEPVVKLEGHSKRVGILSWHPTAHNVLLSAGCDNVLILWNVARGEAVVRMDTVHPDLIYS
ACWNRDGSQILTSCKDKTMRVLDPRKGTVLIEKEKPHDGSRPTRAVFVSDGKILSTGFSR
MSERQVALWDPKNFAEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYGSKESQKGMGYMPKRGLDVHKCEIARFYKLHERKCEPIVMTVPRKSDLFQD
DLYPDTVGPEPSVEADDWFNGKDGQPVLISLKDGFVAPTKAKEFKVHKSLLKTSTPSAGT
PQDNGGEVQSLRKEVKDLNAAVEQLTKRVKELESKQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggttgtgaggtccagcaagttccgccacgtctttggccaggctctgaaa
acggaccagtgctacgatgacatccgaatctcccagatgacgtgggacagcaacttttgc
tccgtcaaccccaagttcgtagccatgatcgtggacgccagtggcggcggcgccttcatg
gtgttgcccatgagcaagacgggacgtatcgacatgtcctacccgactgtgtgcggccac
acgggaccggtcctggatatcgagttttgtcctcacaatgacaacatcatcgccagtggc
tccgaggactgcagcgtcatgatttgggagatcccggacggcgggctgacctcttcgctc
acggaacccgtggtcaagctggagggccactccaagcgcgtcggcatcctgagctggcac
cccaccgcccacaacgtgctgctgagcgcaggctgcgacaacgtgttgatcctgtggaac
gtggctcgcggggaggccgtggtgcggatggacaccgttcaccccgacctcatctacagc
gcctgctggaaccgggacggctcgcagatcctcacctcctgcaaggacaagaccatgcgc
gtgctggacccgcgcaagggcaccgtcctcattgagaaggagaagccccacgacggctcc
aggcccacccgggccgtgttcgtgtccgacgggaagatcctcagcaccggattcagtcgc
atgagcgagaggcaggtggcgctgtgggaccctaagaacttcgcggagcctctgacctta
caggaactggacaccagcagcggcgttcttctgcccttttttgatccagacactggcatc
gtctacctctgtggcaagggggacagcagcattcgttacttcgaggtgaccgatgaagcc
ccgtacgtccactacctgtccatgtacggcagcaaggagagccagaaggggatgggatac
atgcccaagaggggcctggacgtccacaagtgtgaaatcgccaggttctacaaactccac
gagaggaaatgtgagcctatagtcatgacggtgccacgcaagtctgacctgttccaggac
gacctgtacccggacaccgttggtcccgagccttcggttgaagctgacgactggttcaac
ggaaaagatggccagcctgttctgatctccctcaaggacgggttcgtggcgcccaccaag
gccaaagagttcaaagttcacaagagcctcctgaagacatcgaccccttctgccgggact
ccacaggacaacggcggggaggttcagtccttgaggaaggaagtgaaagacctcaacgcg
gcggtggagcagctgaccaagcgcgtgaaggagctggaaagcaagcagtga
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