Pungitius pungitius (ninespine stickleback): 119221089
Help
Entry
119221089 CDS
T07626
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119221089
04081 Hormone signaling
119221089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119221089
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119221089
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119221089
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
119221089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119221089
NCBI-ProteinID:
XP_037333421
LinkDB
All DBs
Position
12:18909045..18955967
Genome browser
AA seq
416 aa
AA seq
DB search
MEPMFNKQDSNSSEGDEKGWPDVPKRKSKNSECAVKSVSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEACCIIDKITRNQCQLCRFKK
CIAVGMAMDLVLDDSKRVAKRRLIEENRQKRKKEEMVRTLQTRPEPDSTEWELIRMATEA
HRHTNAQGSSWKQKRKFLSEDIGQGPIVTTSDGDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALMQTVLLMSSDRLGLTSMEKIEQCQEAYLLAFEHYIN
YRKHAIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQDV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcctatgttcaacaagcaggacagcaactcatcagagggagacgagaaagggtgg
ccggatgtgccgaagagaaagagcaagaacagcgagtgtgcggtgaagagcgtgtcagct
cttagcgtgtctgttccagggtacatccccagctacctggagaaggatgagccgtgcgtg
gtgtgcggcgacaaggcgaccgggtaccactaccgctgcatcacctgcgagggatgcaag
ggtttctttcggcggaccatccaaaagaacctccatccggcctactcctgtaaatatgaa
gcctgctgcatcatcgacaagatcacacgcaaccagtgccagctgtgtcgcttcaagaag
tgcatcgctgtgggcatggccatggacttggtgttggacgactcgaagcgcgtggccaag
cggcgcctgatcgaggagaaccggcagaagaggaagaaggaggagatggtgcgcacgttg
cagacgcggccggagccagacagcactgagtgggagctcatcagaatggcgacggaggcc
caccggcacaccaacgcccagggctccagctggaaacagaagcgcaagtttctgtcggag
gacatcggccagggtcccatcgtgaccacgtcagacggggacaaggtggacctggaggcc
ttcagcgagttcaccaagatcatgaccccggccatcacgcgcgtcgtcgacttcgccaag
aagctgccgatgttctcagagctgccttgtgaggaccagatcatcctgctgaaaggctgc
tgcatggagatcatgtcgctgcgcgccgccgtccgctacgacccggaaagcgagacgctg
acgctgaacggcgagatggccgtgaagcgcgagcagctgaagaacggcgggctgggcgtg
gtgtcagacgccatcttcgatctgggcaagagcctggctcagttcaacctggacgactct
gaggtggctctgatgcagaccgtgctgctcatgagctcagaccggttggggctgaccagc
atggagaagatcgagcagtgccaagaggcctacctgctggcgttcgagcactacatcaac
taccgaaagcacgccattccccacttctggcccaagctgctgatgaaggtgacggacctg
cgcatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gaactcttcccaccgctcttcctcgaggtcttcgaggaccaggacgtgtga
DBGET
integrated database retrieval system
