Pungitius pungitius (ninespine stickleback): 119221108
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Entry
119221108 CDS
T07626
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119221108
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119221108
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119221108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
DUF1542
RsfS
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
119221108
NCBI-ProteinID:
XP_037333456
LinkDB
All DBs
Position
12:7249494..7253184
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AA seq
461 aa
AA seq
DB search
MATASSNNDDTLKDSEHTMDVEEDPATETSQDVLCDSCMDSPSKALRSCMTCLVSYCEAH
LRPHLENAKFQNHRLVDPLHDVDRQTCESSHRRPLERFCLTDGRCLCLECEEHEGHPTAS
VREARTQIETELEKKQKEINQTASATETEIGKLQSDHDWIKSSVQDVCVTVLEQFARLQT
TLEEARRGLVDGLEAEQRKALRQAQSVQAHLERRKTGLMKTLAQMNKLSRSKSDVDFLQG
YSQWKIGVEDVSLPGPNINRMDHLASCLQVVTDSTQELCDLILSSNILKVCKSVGAKSWM
PEPVPSSLPDSETPEDFLKYTRSLTFDPDTIHQFLRVTEDDRKLTNTSPWQHTYPEHPGR
FEYWRQAMTLESLYLGRHYIEAELSGNGAHVGVTYKSIDPKGEQSTSCITGNDSSWCVGR
SSRGFSAWHAGVEEPLDATDVTRLGLTFTEALCLFMMPPAR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaagcagtaacaatgatgacaccttgaaggacagtgagcacaccatggac
gttgaggaggatcctgccaccgagacgtctcaggatgtcttatgtgactcctgcatggac
agccccagcaaggccctgagatcctgcatgacctgcctggtttcttactgcgaggcccac
ctcagaccccatctggagaatgccaagtttcaaaaccatcgtctggtggatcccctccac
gacgtcgaccgtcagacctgtgagtcctcacatcggcgtcctctggagcgcttctgtctg
acggacggccgctgtttgtgcctggagtgtgaggagcacgaagggcacccgactgcctct
gtacgggaggcacggacacagattgagacagagctggagaagaaacaaaaagagatcaat
caaactgcctcggcaactgagacagagatcggaaaactccagagtgaccatgactggatt
aagtcgtcagtgcaggacgtttgtgtcactgtcctggagcagtttgccaggctgcagaca
accctggaggaggccagaagaggactggtggatgggctggaggcagagcagagaaaagcc
ctcagacaggcacagagcgtccaggcacatctggagcggaggaaaacagggctgatgaaa
actttggcccaaatgaacaaactgtcaaggagcaagtctgatgtagacttcctgcagggg
tattcacagtggaagataggcgtggaagatgtaagtctgcctggtccaaacatcaaccgc
atggaccatctggcgtcttgcctccaggtagtgacagattccacccaggagctgtgtgac
ctgatcctctcctcaaacatactcaaagtctgtaaaagtgtaggggcaaaatcctggatg
ccagaacctgtaccttcctcccttcccgattctgagacgccggaggacttcttaaaatac
acaaggagtttaacctttgacccagacaccatccatcagttcctacgtgtaacggaggac
gacagaaagctgaccaacaccagcccctggcagcacacctacccagaacaccctggtcgc
ttcgagtattggcgtcaggcgatgactttagagagcctttacctcgggaggcactacatc
gaggccgaactgagtgggaatggtgcacatgtaggagtcacgtacaagagcatcgatcct
aaaggagagcaaagcaccagctgcatcaccgggaacgactcgtcctggtgcgtggggagg
agcagccgaggcttctctgcctggcacgccggtgtggaggagcccttggatgccacggac
gtcacgaggcttggcttgactttcactgaggctctgtgtctttttatgatgccaccggcc
cgatga
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integrated database retrieval system
