Pungitius pungitius (ninespine stickleback): 119221730
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Entry
119221730 CDS
T07626
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119221730
03036 Chromosome and associated proteins [BR:
ppug03036
]
119221730
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppug03037
]
119221730
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119221730
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119221730
UBL E3 ligases
119221730
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119221730
Cilium and associated proteins [BR:
ppug03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119221730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Extensin_1
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
119221730
NCBI-ProteinID:
XP_062421846
LinkDB
All DBs
Position
1:429673..432946
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AA seq
912 aa
AA seq
DB search
MEPTRMKLRVRRRDNASADATAAANQADEEERSRESGRRGSRRKTGGATSTAANASSWSP
PPPPTSSSASARAAMAVAEEASPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSHNKA
ECPLCKQPFASILHSVRAEDDFKEYTLRPPPANSSVAATVAMVAAMASAARSDHQMRLML
RRHQGADGEEAATTAAARRRQRGRRSGVWEWYLDTPPLALPPLARHPNASPLVAEDSEEG
EELGERRASAGSELAERGVIFEGLTGLSGAEAPVAPNDRAARRLMTRLMARRRLQREGGA
VRRLRERETVALRRALYRSGIRVRGVAGADGNQGKQREITAESFLRNPTHLNRLRPWLRR
ELTVLYGTHGTLVDIVQRIIMARVARHGLEDTPTIEEELRQFLLARTDHFLHELVSFARS
PLSLESYDLQAAYEPPDAAMELDGTSSSSDGSSVIAISEGEEEAGPAGGRSDEPPVGGAY
DNDDVVPSGGGLSLSVWDDETPGPSYSSAEPSCSLAGPLFGHAPKRXTNEERGGREEGAG
GEEEECLIVGFKKPIAERTPELVQLSSDTDEGEKEKKEETEELPPLPASALCYLPTIPPS
TSGSYGGEQEEGGPRARSLSGGSAGSGSSVLAVGPTAPGDGRRGGEEAKDRRRRRKRRKR
IGRKRSGTLHNPNRSLYPAMLRHYSRSSSPLHSSGLGSGSPPSPPGSTWDSYHLSQVSPS
LLLRLVTLSLLFFLLLALRVLPPAGAGGLAVARGGGEKPGGKRKYKSRHLDDKDPTWRPS
SREKGVGGGRSRDRQKRSVGERRSREDRSPSVEIVYEGTAPPPARKRRRKGQLGAQPSSS
PVIITLDSDSSLDDDSSPISSQRTVDFSDLPPLPGPPPPHPGPGVGGRARGPRRPRQHQR
RGRGGLAAGIGR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaccaggatgaagctgcgagtgcgtcgccgcgacaatgcgtctgcggacgcc
acggcggcggcgaaccaggcggacgaagaggagcgtagccgagagagcggccggcgcggc
agcaggaggaaaacaggcggagccacgtcgactgcagccaacgcctcctcctggtcacct
cccccgccgcccacctcctcctccgcctcggcgcgggccgccatggcggtggccgaggag
gcgtcgcccgactccaagtgcccgatctgcctggaccgcttcaataacctggcgtacctg
gaccgctgcctgcaccgcttctgcttcccgtgcatccaggagtggtcccacaacaaggcc
gagtgccccctgtgcaagcagcccttcgcctccatcctgcactcggtgcgcgccgaggac
gacttcaaggagtacacgctgcgcccgccgcccgccaacagcagcgtggccgccaccgtc
gccatggtggcggccatggcctccgcggccaggagcgaccaccagatgaggctgatgctg
aggaggcaccagggcgccgacggcgaggaggcggccacgacggcggcggcgaggaggcgg
cagagggggaggaggtcgggggtgtgggagtggtacctggacacccccccgctcgcactg
ccgcctctggctcgccaccccaatgcgtctccgcttgtggcggaggacagcgaggagggg
gaggagcttggggagcggagggcgagcgctgggtccgagctggcggagcgcggcgtgata
ttcgagggcctgacgggactcagcggcgcggaagcccccgtggcacccaacgaccgggca
gcgcggcggctgatgacccgcctgatggcgaggcggcggttgcagcgggagggcggggcc
gtgcgacggctgagggagagagagacggtggcgctccgtcgggcgctctaccgcagcggc
atacgggtccgcggcgttgccggggctgacggtaaccaggggaaacagcgagaaatcacg
gcggagagcttcctccgtaaccccacccacctgaacaggctccgcccctggctgcggcgg
gagctcacggtgctgtacgggacgcacggcacgctggtggacatcgtccagcgcatcatc
atggcgcgggtggctcgccatggcctggaggacacgcccaccatagaagaagagctgcgg
cagttcctgctggcgcgcaccgaccacttcctgcacgagctggtcagcttcgcgcgctcg
ccgctcagcctggagagctacgacctgcaggcggcgtacgagccgccggacgccgccatg
gagctggacgggacgagcagctcctccgacggcagctccgtcatcgccatctccgagggc
gaggaggaggcggggcctgccgggggaaggtctgacgagcccccggtgggcggggcctac
gacaacgacgacgtggtgccatcgggaggcggcctcagcctttcagtctgggatgacgag
actccaggcccctcctactccagcgccgagccgtcctgctcgctagccggcccgctgttt
ggccacgcccccaagaggnccaccaatgaggagcggggaggcagggaggagggggcgggg
ggggaggaggaggagtgtctgatcgtggggttcaagaagccgatagcggagcggactcct
gagctggtgcagctctcctctgacaccgacgagggggagaaggagaagaaggaggagacg
gaggaactccctcccctccccgcctccgccctctgttacctacccacaatccctccctcc
acgtcgggctcctacggcggcgagcaggaggagggcgggcctcgtgctcgttccttgtct
ggcggctccgcaggaagcggcagctcggtgctcgccgtgggcccgacggcgcccggcgat
gggaggcgaggtggggaggaggccaaagacaggaggaggaggaggaagaggaggaagagg
attgggcgcaagaggagcggcaccctgcacaaccccaaccgctccctctatcccgcaatg
ctgcgccactactcgcgctcctcctcgccgctccactccagcgggttgggctccggctcg
ccgcccagcccccccggctccacctgggactcctaccacctctcccaggtgtccccctct
ctcctcctccgcctcgtcacactctcgttgctcttcttcctcctcctcgcccttcgggtc
ctcccccccgccggcgccggtggcctcgctgtcgcccggggaggcggcgagaaacccggc
gggaagaggaagtacaagagccgccacctggacgacaaggaccccacctggaggccgagc
agccgggagaagggggtggggggagggaggagtcgagacaggcagaagaggagcgtcggc
gagaggagaagccgagaggaccggagccccagcgtggaaatcgtctacgagggcaccgcc
cccccccccgcccgcaagcgccgcaggaagggtcagctcggggcgcagcccagcagctcg
ccggtcatcatcaccttggacagcgacagcagcctcgatgatgacagcagtccaatcagc
agccagaggaccgtcgacttctccgacctcccccccctgccggggccccccccccctcat
cctggaccgggggtcggaggtcgagccagggggccccgtcgccctcgacaacatcagcga
cgtggacgtggagggctcgccgctgggatcggacgatga
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